Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 AL035666.1-201ENST00000446195 348 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 RPL23AP43-201ENST00000446445 471 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AL354710.1-201ENST00000453641 246 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 RPL30P15-201ENST00000457129 321 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 RNU7-59P-201ENST00000459101 61 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 RNA5SP454-201ENST00000517231 127 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 MIR4675-201ENST00000577898 77 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 PSMA6P4-201ENST00000603247 718 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AL390240.1-201ENST00000612950 384 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 SMG1P7-201ENST00000565246 2704 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 AC122713.2-201ENST00000624942 3335 ntBASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
LIMD1Q9UGP4 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 CNTNAP4-209ENST00000622250 3783 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 MAMDC2-AS1-202ENST00000414515 2097 ntTSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC244517.1-201ENST00000606030 2086 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 Y_RNA.378-201ENST00000365652 113 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 MIR92A2-201ENST00000385299 75 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL139397.2-201ENST00000404529 772 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 MIR548F4-201ENST00000408515 105 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 OR2A2-201ENST00000408979 1051 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC017035.1-201ENST00000411999 1115 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL358176.3-201ENST00000420757 454 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL391987.1-201ENST00000441025 200 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 GAPDHP33-201ENST00000443168 1013 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL118520.1-201ENST00000450770 291 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC128716.1-201ENST00000475129 166 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC068305.1-201ENST00000497406 726 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL137161.1-201ENST00000532231 390 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC092375.1-201ENST00000550410 637 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL118558.2-201ENST00000556294 238 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC023827.2-201ENST00000566880 1061 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 MIR3614-201ENST00000581261 86 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC009955.2-201ENST00000597288 542 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL670379.11-201ENST00000604059 253 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL670379.10-201ENST00000604330 253 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL670379.12-201ENST00000605291 253 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AL670379.9-201ENST00000605428 253 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 DLC1-215ENST00000520226 3556 ntTSL 2 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
LIMD1Q9UGP4 AC011978.2-201ENST00000569835 2054 ntBASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LIMD1Q9UGP4 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 207.1 ms