Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 PLCE1P1-201ENST00000622094 305 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC009950.2-201ENST00000636548 183 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC006042.3-201ENST00000454684 1469 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 AC024560.2-201ENST00000507981 1497 ntBASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.15□□□□□ -1.91
CTNNBIP1Q9NSA3 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 LARP1BP1-201ENST00000506036 1359 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 RNA5SP505-201ENST00000364748 108 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 RNU6-244P-201ENST00000391028 104 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 ELOCP19-201ENST00000411919 318 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 MTND2P16-201ENST00000419987 799 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 RPL21P109-201ENST00000422213 475 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AL392003.1-201ENST00000434394 243 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 CBX1P1-201ENST00000440184 427 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 ARL5AP2-201ENST00000444698 533 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 NANOGP10-201ENST00000453325 895 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 RPL31P13-201ENST00000484151 370 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC041039.1-201ENST00000485656 536 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 RPL32P9-201ENST00000487963 407 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC013356.1-201ENST00000489027 564 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC090071.1-201ENST00000507713 644 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 EIF4EP5-201ENST00000528228 640 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC069366.1-201ENST00000583159 838 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC006116.5-201ENST00000591936 559 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC092653.1-201ENST00000608509 531 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC245389.2-201ENST00000616023 576 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC243756.2-201ENST00000618406 463 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC242843.1-201ENST00000618702 573 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 U7.8-201ENST00000619968 63 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 MIR8059-201ENST00000620427 81 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AC011944.2-201ENST00000624440 683 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 RPS4XP5-202ENST00000449995 1334 ntBASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CTNNBIP1Q9NSA3 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 FAM91A3P-201ENST00000456826 2544 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 RNA5SP443-201ENST00000363083 132 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 MIR591-201ENST00000385290 95 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 RNU11-4P-201ENST00000391149 133 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 EI24P2-201ENST00000397776 1076 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 RPL23AP38-201ENST00000423801 469 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 NEK4P1-201ENST00000433383 879 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AL157827.1-201ENST00000447622 132 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 RPL29P29-201ENST00000448725 423 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AC104629.2-201ENST00000468627 598 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AC011276.1-201ENST00000469688 323 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 RPS27AP13-201ENST00000498403 237 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 HMGB3P15-201ENST00000507326 574 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 PCNAP1-202ENST00000595299 752 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AC022146.1-201ENST00000595307 847 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 IPO5P1-202ENST00000600039 287 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AC234771.5-201ENST00000600161 514 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AL356218.2-201ENST00000605264 187 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AC090525.3-201ENST00000605601 189 ntBASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.13□□□□□ -1.91
CTNNBIP1Q9NSA3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms