Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 IQCB2P-201ENST00000401788 1633 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 RNU6-532P-201ENST00000384318 107 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 MIR137-201ENST00000385223 102 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 ENSAP1-201ENST00000392855 326 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 RPL5P19-201ENST00000404228 893 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 MTATP6P20-201ENST00000414147 562 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AL807761.1-201ENST00000417622 171 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 NANOGP5-201ENST00000424456 877 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 MTND2P5-201ENST00000432656 1006 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 ELOCP11-201ENST00000436690 332 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 ELOCP16-201ENST00000444494 332 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 RPL23AP2-201ENST00000471227 466 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC083829.1-201ENST00000503756 657 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC020699.1-201ENST00000505161 445 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 RAB9BP1-201ENST00000519581 626 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC125612.1-201ENST00000547580 377 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 MTCYBP23-201ENST00000558717 1102 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 ZNF971P-201ENST00000562068 1249 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 MIR4284-201ENST00000578924 81 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC073387.2-201ENST00000604797 784 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 RNU4-5P-201ENST00000607255 135 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 AC006963.1-201ENST00000624003 1052 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 BDP1P-201ENST00000582658 1990 ntBASIC4.29□□□□□ -1.72
SIX2Q9NPC8 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SIX2Q9NPC8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 PROS2P-201ENST00000474651 1951 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 U6.112-201ENST00000384129 70 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 RNU6-729P-201ENST00000384399 107 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 MIR142-201ENST00000384835 87 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 RNU6-932P-201ENST00000391108 106 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC233289.1-201ENST00000403700 508 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AL034374.1-201ENST00000406329 351 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 HMGB3P31-201ENST00000413333 595 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AL356095.1-201ENST00000417217 199 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 OSTCP5-201ENST00000425293 453 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 NPM1P34-201ENST00000428821 893 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC087650.1-201ENST00000431445 468 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 MTND1P33-201ENST00000446251 917 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC092685.1-201ENST00000447960 1243 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 RPS17P13-201ENST00000448974 407 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 TPT1P13-201ENST00000449760 499 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 MTND2P8-201ENST00000450555 1025 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC021205.1-201ENST00000468797 348 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC006463.2-201ENST00000473326 348 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC091544.1-201ENST00000484702 348 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 RPS23P1-201ENST00000491662 432 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AL132838.2-201ENST00000492041 314 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC087369.1-201ENST00000520775 996 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 EEF1A1P37-201ENST00000522748 715 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC011611.5-201ENST00000552477 578 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 MRPS35P3-201ENST00000603189 709 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AP002906.1-201ENST00000603405 233 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AC068313.1-201ENST00000604028 1008 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 MIR6867-201ENST00000610636 67 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 OR6C71P-202ENST00000641886 1107 ntBASIC4.28□□□□□ -1.72
SIX2Q9NPC8 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SIX2Q9NPC8 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.28□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 155.5 ms