Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 CYP4F29P-201ENST00000420685 446 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AL445528.1-201ENST00000426330 420 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AL451062.2-201ENST00000427515 271 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 UBE2V2P3-201ENST00000433562 437 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 ELOCP18-201ENST00000434209 337 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 RRM2P4-201ENST00000441721 562 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 TVP23BP2-201ENST00000455082 615 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC022034.3-201ENST00000471393 478 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 RPS29P19-201ENST00000479709 171 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 MTND3P6-201ENST00000485242 339 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 OR52A4P-203ENST00000498233 1014 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 RN7SKP234-201ENST00000517173 224 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 PHBP17-201ENST00000528576 541 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC006064.5-201ENST00000541782 248 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 HYKK-203ENST00000563233 734 ntTSL 2 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 MTCO3P22-201ENST00000603219 784 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC024023.1-201ENST00000624530 922 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 AC138649.5-201ENST00000637456 137 ntBASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
TM9SF3Q9HD45 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
TM9SF3Q9HD45 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 RNA5SP391-201ENST00000363456 119 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 SNORA70E-201ENST00000384492 135 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 MIR1911-201ENST00000410783 80 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC115285.1-201ENST00000424879 736 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 ARL4AP4-201ENST00000434170 518 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 TPTE2P1-204ENST00000435256 593 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 HPRT1P2-201ENST00000505250 544 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC022655.2-201ENST00000577280 318 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 MIR4444-1-201ENST00000581696 74 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 MIR4444-2-201ENST00000584390 74 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AL606490.9-201ENST00000603331 271 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC005034.4-201ENST00000603612 899 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 SUMO2P14-201ENST00000604488 293 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AL451086.1-201ENST00000605596 223 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC112503.1-201ENST00000608436 391 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC121761.2-201ENST00000617300 689 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 AC112200.1-201ENST00000625015 234 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 NOL8P1-201ENST00000508336 3529 ntBASIC4.15□□□□□ -1.75
TM9SF3Q9HD45 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 AC007342.9-201ENST00000623877 1385 ntBASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.14□□□□□ -1.75
TM9SF3Q9HD45 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms