Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC074029.1-201ENST00000552531 1044 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 MTND3P12-201ENST00000559068 328 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC092954.1-201ENST00000609121 445 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC023043.4-201ENST00000612081 449 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC107075.1-201ENST00000613695 314 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC009318.3-201ENST00000616916 503 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC091304.6-201ENST00000619761 202 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AP003072.4-201ENST00000624580 310 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AL031119.1-201ENST00000404707 1879 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 AC135352.1-201ENST00000506173 1418 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RTFDC1Q9BY42 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 MTND4P13-201ENST00000402078 1023 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC011933.1-201ENST00000413334 321 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 PRELID3BP11-201ENST00000414230 479 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 COX7BP2-201ENST00000437976 242 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AL359073.1-201ENST00000448036 403 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 RPL23AP15-201ENST00000450202 459 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC116533.1-201ENST00000459748 321 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC109445.1-201ENST00000512356 383 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC009094.1-201ENST00000564443 426 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC093519.1-201ENST00000566109 298 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC021171.1-201ENST00000603137 706 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC004908.3-201ENST00000610248 625 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC015908.5-201ENST00000623289 343 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 AC092376.2-201ENST00000622621 4116 ntBASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
RTFDC1Q9BY42 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RNU6-115P-201ENST00000364310 107 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RNU1-64P-201ENST00000365443 163 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RNA5SP366-201ENST00000365454 123 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RNU5A-2P-201ENST00000384337 116 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RNU6ATAC34P-201ENST00000408879 121 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RPL7P57-201ENST00000423238 740 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RGS17P1-201ENST00000423358 553 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 IPMKP1-201ENST00000425988 855 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 OR4C10P-201ENST00000434991 931 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RPL12P46-201ENST00000436610 195 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AC114755.5-201ENST00000447760 831 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 RFC5P1-201ENST00000454419 874 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AC126121.1-201ENST00000482313 553 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 UBA52P3-201ENST00000491303 382 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AC091951.3-201ENST00000504093 246 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 NDUFB4P12-201ENST00000513465 390 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 SOD1P3-201ENST00000518682 454 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AC005832.3-201ENST00000537929 631 ntBASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.62□□□□□ -1.51
RTFDC1Q9BY42 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms