Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VRK1Q99986 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK1Q99986 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VRK1Q99986 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 RNU6-178P-201ENST00000384631 104 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC025750.1-201ENST00000399891 379 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 AL391361.1-201ENST00000405580 489 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 RN7SKP56-201ENST00000410513 331 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 BMS1P17-202ENST00000416720 316 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK1Q99986 RPL12P34-201ENST00000424532 479 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 PRELID3BP10-201ENST00000431957 584 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 Z74696.2-201ENST00000436514 498 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC105402.2-201ENST00000438503 358 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 OR7E116P-201ENST00000448529 957 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 SNRPFP4-201ENST00000456366 242 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 RNU7-136P-201ENST00000458819 69 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 RPS23P2-201ENST00000463671 415 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AP000942.1-201ENST00000463969 747 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC010683.1-201ENST00000473673 378 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 RN7SL570P-201ENST00000484405 292 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC011825.1-201ENST00000484967 388 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 DUTP7-201ENST00000507982 486 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 POU5F1P7-201ENST00000508759 541 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 AC074255.1-201ENST00000511259 501 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK1Q99986 MRPS16P1-201ENST00000523462 412 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK1Q99986 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 MIR4504-201ENST00000577413 92 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 MIR4489-201ENST00000578869 62 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.87□□□□□ -1.63
VRK1Q99986 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.87□□□□□ -1.63
VRK1Q99986 AC005771.1-201ENST00000585581 349 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 AP003465.2-201ENST00000602571 373 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 NDUFA8P1-201ENST00000605525 367 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC4.87□□□□□ -1.63
VRK1Q99986 BX323046.1-201ENST00000610145 535 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 OR52B5P-202ENST00000641118 1110 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AC112198.2-201ENST00000426589 6996 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 CASC19-221ENST00000641309 1382 ntBASIC4.87□□□□□ -1.63
VRK1Q99986 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.87□□□□□ -1.63
VRK1Q99986 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VRK1Q99986 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VRK1Q99986 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VRK1Q99986 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VRK1Q99986 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK1Q99986 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK1Q99986 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK1Q99986 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.86□□□□□ -1.63
VRK1Q99986 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK1Q99986 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.86□□□□□ -1.63
VRK1Q99986 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VRK1Q99986 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK1Q99986 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK1Q99986 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VRK1Q99986 OR10J6P-201ENST00000289731 930 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.86□□□□□ -1.63
VRK1Q99986 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
VRK1Q99986 GAPDHP24-201ENST00000328713 983 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VRK1Q99986 RN7SKP160-201ENST00000363804 340 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 RN7SKP124-201ENST00000364730 341 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 U3.28-201ENST00000391249 210 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 OR6C69P-201ENST00000394268 893 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 ARF4P3-201ENST00000397387 509 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 RN7SKP266-201ENST00000410232 287 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 RNU2-21P-201ENST00000410368 188 ntBASIC4.86□□□□□ -1.63
VRK1Q99986 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.86□□□□□ -1.63
VRK1Q99986 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms