Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC008147.3-201ENST00000548666 354 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC022968.1-201ENST00000567372 442 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC025627.2-201ENST00000576220 160 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 BDH2P1-201ENST00000602288 736 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC112230.1-201ENST00000604342 547 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 HMGN2P28-201ENST00000606102 262 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 MIR7848-201ENST00000617402 101 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 AC092159.4-201ENST00000624944 550 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 ATE1-AS1-202ENST00000636460 506 ntBASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
SPTSSBQ8NFR3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
SPTSSBQ8NFR3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.03□□□□□ -2.09
SPTSSBQ8NFR3 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
SPTSSBQ8NFR3 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 MTCO1P24-201ENST00000515438 1558 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 MTCO1P8-201ENST00000416914 1523 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 Z83843.1-201ENST00000604070 3685 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RNA5SP183-201ENST00000362452 119 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RNU6-335P-201ENST00000364563 113 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 MIR431-201ENST00000385266 114 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RNU6ATAC5P-201ENST00000388104 126 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 ZNF602P-201ENST00000405929 924 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RPL7P10-201ENST00000417407 739 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 OR1AA1P-201ENST00000419597 916 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RFESDP1-201ENST00000422350 461 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC244033.1-201ENST00000426826 870 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 HIGD1AP12-201ENST00000427832 281 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 B3GNT2P1-201ENST00000434960 952 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RPL21P2-201ENST00000440049 481 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 HMGN1P36-201ENST00000446623 298 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AURKAPS1-201ENST00000451805 1212 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RNU6ATAC28P-201ENST00000459249 118 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RPL21P11-201ENST00000461458 483 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC063943.1-201ENST00000465434 453 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 RPS26P21-201ENST00000475397 348 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 VN1R105P-201ENST00000486595 910 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 PFN1P8-201ENST00000497012 543 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 IGBP1P5-201ENST00000507524 1000 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 MRPS33P2-201ENST00000507850 322 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 TBCA-203ENST00000517679 545 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 IGKV3D-34-201ENST00000522638 302 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AP001636.2-201ENST00000525517 696 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AP000827.1-201ENST00000527814 258 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 OR5AP1P-201ENST00000529730 940 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 HSPE1P20-201ENST00000538133 289 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AL121766.1-201ENST00000547436 487 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC008507.1-201ENST00000587506 734 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC069304.3-201ENST00000603938 1084 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AL627309.6-201ENST00000606857 840 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AL391834.1-201ENST00000609609 560 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 uc_338.13-201ENST00000618243 179 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC091905.4-201ENST00000623432 202 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC084035.1-201ENST00000634543 607 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 AC119674.1-212ENST00000641155 993 ntBASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
SPTSSBQ8NFR3 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms