Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 OR5D15P-201ENST00000531671 942 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 GNRHR2P1-201ENST00000555315 631 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC106734.1-201ENST00000568646 663 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC006270.2-201ENST00000578523 652 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 MIR4489-201ENST00000578869 62 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 MRPS35P3-201ENST00000603189 709 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 HMGB1P50-201ENST00000605814 607 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AP000255.1-201ENST00000610276 676 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 uc_338.13-201ENST00000618243 179 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 GABPAP-201ENST00000419271 1356 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 AL021368.2-201ENST00000606125 5352 ntBASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC71LQ8N9Z2 SEPT7P7-201ENST00000420492 1301 ntBASIC3.46□□□□□ -1.85
CCDC71LQ8N9Z2 CIR1P2-201ENST00000514821 1342 ntBASIC3.46□□□□□ -1.85
CCDC71LQ8N9Z2 AC104446.1-201ENST00000613728 1321 ntBASIC3.46□□□□□ -1.85
CCDC71LQ8N9Z2 AC008432.1-201ENST00000615912 1320 ntBASIC3.46□□□□□ -1.85
CCDC71LQ8N9Z2 MFSD8-213ENST00000641134 1327 ntBASIC3.46□□□□□ -1.85
CCDC71LQ8N9Z2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 MTCO1P4-201ENST00000520516 1409 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 MTCO1P11-201ENST00000429111 1528 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 C4BPAP1-201ENST00000415474 1893 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 OR4K17-201ENST00000315543 1032 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 RNA5SP322-201ENST00000363617 119 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 SNORA11F-201ENST00000408237 128 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 RNU2-37P-201ENST00000410695 177 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 MTND2P15-201ENST00000418575 892 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC008173.1-201ENST00000418901 264 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 UQCRBP1-201ENST00000421129 336 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 ETF1P3-201ENST00000430422 1160 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC011742.1-201ENST00000431448 434 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 MRPL50P1-201ENST00000431951 384 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC011998.1-201ENST00000433403 117 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AL158053.1-201ENST00000441503 453 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC073648.4-201ENST00000442655 781 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 VN1R25P-201ENST00000443385 738 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AL035407.2-201ENST00000454090 378 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 VN1R40P-201ENST00000455196 941 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 RNU7-170P-201ENST00000459303 61 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC008953.1-201ENST00000497334 318 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 NAMPTP2-201ENST00000505629 1115 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 IGBP1P5-201ENST00000507524 1000 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC121161.1-201ENST00000510606 652 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC005798.1-201ENST00000513715 387 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC010342.1-201ENST00000514047 877 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 NARSP2-201ENST00000518524 679 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 COX6B1P6-201ENST00000522347 255 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AP000916.1-201ENST00000533869 835 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC125494.3-201ENST00000602759 455 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 LLPHP1-201ENST00000603571 367 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AP003117.2-201ENST00000606010 545 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 VN1R9P-201ENST00000614184 867 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AP000943.4-201ENST00000622912 357 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AC024595.1-201ENST00000623088 387 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AL773545.4-201ENST00000637262 310 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AL513478.4-201ENST00000641636 310 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 MTND4P10-201ENST00000446199 1363 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 AF127577.6-201ENST00000623352 2191 ntBASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CCDC71LQ8N9Z2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CCDC71LQ8N9Z2 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms