Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 AC103881.1-201ENST00000603476 538 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AC025588.3-201ENST00000604182 274 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AC008966.2-201ENST00000606157 453 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AF129408.1-201ENST00000608767 431 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AL159169.3-201ENST00000608871 561 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AC009318.4-201ENST00000620496 486 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AC112200.1-201ENST00000625015 234 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 MIR4278-201ENST00000636094 69 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 MAPK10-372ENST00000641954 3413 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 AL365440.1-201ENST00000436135 2167 ntBASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
LINC01561Q8N1V8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 GDI2P1-201ENST00000429312 1336 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 MTND4P9-201ENST00000507819 1346 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 Y_RNA.493-201ENST00000384422 102 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL590762.2-201ENST00000395798 571 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AP002530.1-201ENST00000405705 684 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 RN7SKP216-201ENST00000411050 312 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 NPM1P4-201ENST00000414095 812 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 MTCO3P1-205ENST00000422088 832 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 GTF2IP7-202ENST00000436677 309 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AURKAPS1-201ENST00000451805 1212 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC092647.2-201ENST00000452998 253 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 RPS26P28-201ENST00000470806 348 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 RPL23AP2-201ENST00000471227 466 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 NCOR1P1-202ENST00000486162 291 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 RNA5SP73-201ENST00000516744 108 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 SNORA48.10-201ENST00000516965 160 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AP001189.2-201ENST00000527320 189 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL389895.1-201ENST00000554127 252 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL049839.1-201ENST00000556151 657 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC015912.2-201ENST00000571053 181 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC091178.1-203ENST00000584586 279 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 FKBP1AP1-201ENST00000594588 318 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL390838.2-201ENST00000602394 274 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC025946.2-201ENST00000603398 234 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC069545.1-201ENST00000605671 358 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC097504.2-201ENST00000608088 454 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC126915.2-201ENST00000610957 190 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC079395.2-201ENST00000610982 737 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC010975.3-201ENST00000618727 978 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL359757.1-201ENST00000623176 255 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC104985.3-201ENST00000623479 597 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC004808.1-201ENST00000627671 721 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 AL136164.3-201ENST00000624429 3978 ntBASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.2□□□□□ -1.9
LINC01561Q8N1V8 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 SNURFL-201ENST00000309296 343 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 U3.2-201ENST00000362981 210 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RNU5E-10P-201ENST00000363506 118 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 SNORA51.6-201ENST00000384151 125 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RNU6-1176P-201ENST00000390955 107 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 RNU6-821P-201ENST00000390995 107 ntBASIC3.19□□□□□ -1.9
LINC01561Q8N1V8 SNORA17A-201ENST00000391185 133 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms