Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC005242.1-201ENST00000585658 438 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 SUMO2P14-201ENST00000604488 293 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AL355816.1-201ENST00000607951 118 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC023043.4-201ENST00000612081 449 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 MIR7703-201ENST00000620784 77 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 C2orf27A-204ENST00000623058 969 ntBASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
NUDCD3Q8IVD9 AC006042.3-201ENST00000454684 1469 ntBASIC3.84□□□□□ -1.8
NUDCD3Q8IVD9 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.84□□□□□ -1.8
NUDCD3Q8IVD9 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.84□□□□□ -1.8
NUDCD3Q8IVD9 RNF6P1-201ENST00000444889 1784 ntBASIC3.84□□□□□ -1.8
NUDCD3Q8IVD9 CEP170P1-201ENST00000502249 4587 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 SAGE2P-201ENST00000420011 2126 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 OR4K17-201ENST00000315543 1032 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 MIR383-201ENST00000362257 73 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 RNU1-87P-201ENST00000363727 170 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 MIR124-3-201ENST00000384866 87 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 MIR937-201ENST00000401271 86 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 RPS4XP9-201ENST00000405151 780 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AC092832.1-201ENST00000422934 400 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 CNOT7P1-201ENST00000429006 852 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 RPS24P8-201ENST00000431490 402 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 MTND2P8-201ENST00000450555 1025 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 RN7SL303P-201ENST00000469773 251 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 Vault.1-201ENST00000516474 102 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AL121576.1-201ENST00000556055 276 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 CBX3P2-202ENST00000583365 535 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 ZNF92P3-201ENST00000596594 954 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AL049634.3-201ENST00000604968 457 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AC019193.2-201ENST00000610012 634 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AC104307.1-201ENST00000616142 196 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 AP002001.2-201ENST00000529025 1469 ntBASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
NUDCD3Q8IVD9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AL353743.4-201ENST00000422653 1547 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 GTF2H2B-203ENST00000508065 1432 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 LARP1BP1-201ENST00000506036 1359 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 DCAF13P1-201ENST00000495256 1330 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 DCAF13P3-201ENST00000561147 1334 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 RNU6-883P-201ENST00000384597 107 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 MTND3P20-201ENST00000407663 186 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 ELOCP19-201ENST00000411919 318 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 TPT1P2-201ENST00000413105 503 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AC108032.1-201ENST00000416706 207 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 YY1P1-201ENST00000427625 668 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 RPS26P40-201ENST00000435209 294 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 MTND2P3-201ENST00000452458 470 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AP000873.1-201ENST00000463987 400 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 OR5H4P-201ENST00000510851 923 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AC021146.1-201ENST00000511202 716 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 RNU6-362P-201ENST00000516736 90 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AC026616.1-201ENST00000523157 525 ntBASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC3.82□□□□□ -1.8
NUDCD3Q8IVD9 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms