Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 SNORA72.3-201ENST00000365074 132 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 SNORA70F-201ENST00000384142 135 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 MIR192-201ENST00000384915 110 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 ENSAP1-201ENST00000392855 326 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 MCTS2P-201ENST00000394552 546 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 RPS3AP23-201ENST00000401762 784 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 RPS4XP9-201ENST00000405151 780 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 RNU6-272P-201ENST00000411028 104 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC119751.6-201ENST00000416712 186 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 Z74021.1-201ENST00000423610 407 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC092634.2-201ENST00000428146 1010 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 MTCYBP15-201ENST00000433123 1127 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AL645638.1-201ENST00000440519 361 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AL590399.6-201ENST00000446396 307 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 ISCUP1-201ENST00000454451 448 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC091959.2-201ENST00000477363 321 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC091860.1-201ENST00000505723 432 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC135352.1-201ENST00000506173 1418 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC096571.1-202ENST00000506634 735 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC008837.1-201ENST00000511513 412 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 NDUFS5P6-201ENST00000529136 295 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 CYCSP28-201ENST00000534284 321 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC105129.1-201ENST00000560250 297 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 DHX40P1-201ENST00000588725 1412 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AL391001.1-201ENST00000602747 715 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC096947.1-201ENST00000603233 470 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC007566.2-201ENST00000603642 413 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC090912.3-201ENST00000609775 533 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 VN1R74P-201ENST00000613259 503 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AC026368.1-201ENST00000614934 690 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 AL359757.1-201ENST00000623176 255 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 KARSP3-201ENST00000571212 1504 ntBASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.25□□□□□ -1.73
NUP54Q7Z3B4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AL122126.1-201ENST00000546905 1318 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 CYB5AP4-201ENST00000396692 399 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 DSTNP4-201ENST00000399472 474 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AL355379.1-201ENST00000405542 640 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC106883.1-201ENST00000418805 562 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 PTGES3P1-201ENST00000439531 483 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC244505.3-201ENST00000454598 187 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 MTND4LP2-201ENST00000502312 285 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 TMEM248P1-201ENST00000510579 951 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AP004242.1-201ENST00000533701 349 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC137768.1-201ENST00000549998 553 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 ATP5J2P6-201ENST00000565203 266 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC209154.1-201ENST00000582156 337 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 uc_338.32-201ENST00000615087 172 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 U73479.1-201ENST00000618062 168 ntBASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.24□□□□□ -1.73
NUP54Q7Z3B4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms