Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.68□□□□□ -1.66
USP41Q3LFD5 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.68□□□□□ -1.66
USP41Q3LFD5 AC017104.5-201ENST00000637647 639 ntBASIC4.68□□□□□ -1.66
USP41Q3LFD5 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
USP41Q3LFD5 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP41Q3LFD5 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.68□□□□□ -1.66
USP41Q3LFD5 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP41Q3LFD5 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
USP41Q3LFD5 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.68□□□□□ -1.66
USP41Q3LFD5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
USP41Q3LFD5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.68□□□□□ -1.66
USP41Q3LFD5 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 ANKRD36P1-201ENST00000344424 659 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 OR52E6-202ENST00000379946 954 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 SNORA11C-201ENST00000408532 129 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 PDSS1P1-201ENST00000422953 1114 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC092648.1-201ENST00000425870 423 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 RPL23AP25-201ENST00000430973 463 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 KCTD10P1-201ENST00000434203 625 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 PPIAP13-201ENST00000434706 478 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 ELOCP10-201ENST00000440624 327 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC010469.1-201ENST00000463864 576 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC091959.2-201ENST00000477363 321 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC091860.1-201ENST00000505723 432 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 ATP1B1P1-201ENST00000509767 915 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC010306.1-201ENST00000523223 1117 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC006116.5-201ENST00000591936 559 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC090181.2-201ENST00000602975 672 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC123786.2-201ENST00000603459 275 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 ELOCP34-201ENST00000604436 327 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC024060.1-201ENST00000607052 494 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC009974.1-201ENST00000608881 455 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC006946.3-201ENST00000609791 756 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC015813.4-201ENST00000610469 179 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 SNX18P1Y-201ENST00000616231 511 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC234782.5-201ENST00000617723 324 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 MIR8059-201ENST00000620427 81 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 MIR7154-201ENST00000620673 73 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC116563.2-201ENST00000624751 535 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 EOGT-210ENST00000615922 1931 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AC105074.1-201ENST00000623380 3095 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
USP41Q3LFD5 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.67□□□□□ -1.66
USP41Q3LFD5 NSRP1P1-201ENST00000444067 1693 ntBASIC4.67□□□□□ -1.66
USP41Q3LFD5 AL672167.1-205ENST00000641112 3080 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
USP41Q3LFD5 MIR92A2-201ENST00000385299 75 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC093719.1-202ENST00000392735 373 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AL161909.1-201ENST00000397390 712 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 RNA5SP317-201ENST00000410176 116 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 RNA5SP311-201ENST00000411290 116 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 RPS20P14-201ENST00000412545 360 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 NRBF2P2-201ENST00000413087 861 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 RPS7P9-201ENST00000414704 586 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 RPL6P29-201ENST00000414863 865 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC062016.2-201ENST00000420950 676 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC073069.1-201ENST00000428657 441 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 RPL21P91-201ENST00000429231 479 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 MTND2P5-201ENST00000432656 1006 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 OR4C10P-201ENST00000434991 931 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC234064.1-201ENST00000436312 247 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 UBE2V1P3-201ENST00000439651 417 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 RPS7P5-201ENST00000441482 581 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AL512326.1-201ENST00000443050 721 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 YWHAQP9-201ENST00000445891 512 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 MTND2P8-201ENST00000450555 1025 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 VN1R32P-201ENST00000452234 905 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 AC092155.2-201ENST00000454675 477 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 XACT-201ENST00000468762 497 ntTSL 5 BASIC4.66□□□□□ -1.66
USP41Q3LFD5 RPL21P131-201ENST00000497298 483 ntBASIC4.66□□□□□ -1.66
USP41Q3LFD5 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms