Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 SNORA70.14-201ENST00000516205 110 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.63□□□□□ -1.83
RFX4Q33E94 HAUS1P3-201ENST00000523909 662 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 AL121576.1-201ENST00000556055 276 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 NPM1P47-201ENST00000560843 856 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.63□□□□□ -1.83
RFX4Q33E94 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.63□□□□□ -1.83
RFX4Q33E94 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.63□□□□□ -1.83
RFX4Q33E94 AC005255.1-201ENST00000593748 216 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 AC010680.4-201ENST00000605334 543 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.63□□□□□ -1.83
RFX4Q33E94 uc_338.9-201ENST00000617424 182 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 MIR7151-201ENST00000617477 60 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 HPVC1-201ENST00000629899 1198 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFX4Q33E94 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.63□□□□□ -1.83
RFX4Q33E94 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFX4Q33E94 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
RFX4Q33E94 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
RFX4Q33E94 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
RFX4Q33E94 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.63□□□□□ -1.83
RFX4Q33E94 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFX4Q33E94 MTND4P21-201ENST00000453886 1357 ntBASIC3.63□□□□□ -1.83
RFX4Q33E94 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
RFX4Q33E94 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC3.62□□□□□ -1.83
RFX4Q33E94 CCT8P1-201ENST00000413611 1657 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFX4Q33E94 PWAR6-201ENST00000552334 4618 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFX4Q33E94 AC066616.2-201ENST00000559334 1481 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
RFX4Q33E94 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.62□□□□□ -1.83
RFX4Q33E94 SNORD51.1-201ENST00000365405 77 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.62□□□□□ -1.83
RFX4Q33E94 AC010385.1-201ENST00000412374 256 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.62□□□□□ -1.83
RFX4Q33E94 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.62□□□□□ -1.83
RFX4Q33E94 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.62□□□□□ -1.83
RFX4Q33E94 MTND4P24-201ENST00000424002 397 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AC002075.2-201ENST00000425207 252 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.62□□□□□ -1.83
RFX4Q33E94 CYCSP42-201ENST00000450823 238 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC3.62□□□□□ -1.83
RFX4Q33E94 PPIAP15-201ENST00000479662 484 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.62□□□□□ -1.83
RFX4Q33E94 RN7SL604P-201ENST00000492589 296 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AC093840.1-201ENST00000511599 336 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 MTND2P31-201ENST00000512602 616 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.62□□□□□ -1.83
RFX4Q33E94 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.62□□□□□ -1.83
RFX4Q33E94 RNU6-1231P-201ENST00000517185 103 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.62□□□□□ -1.83
RFX4Q33E94 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.62□□□□□ -1.83
RFX4Q33E94 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.62□□□□□ -1.83
RFX4Q33E94 CR383656.6-201ENST00000550518 394 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.62□□□□□ -1.83
RFX4Q33E94 CKS1BP1-201ENST00000555221 240 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.62□□□□□ -1.83
RFX4Q33E94 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.62□□□□□ -1.83
RFX4Q33E94 SS18L2P2-201ENST00000583960 235 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.62□□□□□ -1.83
RFX4Q33E94 AC068790.4-201ENST00000602474 263 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AC040174.2-201ENST00000602701 465 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AL391834.1-201ENST00000609609 560 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AL121890.3-201ENST00000618494 516 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AL713922.2-201ENST00000619384 716 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 AP003072.4-201ENST00000624580 310 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.62□□□□□ -1.83
RFX4Q33E94 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC3.62□□□□□ -1.83
RFX4Q33E94 AL163152.1-201ENST00000642001 374 ntBASIC3.62□□□□□ -1.83
RFX4Q33E94 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
RFX4Q33E94 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
RFX4Q33E94 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
RFX4Q33E94 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RFX4Q33E94 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
RFX4Q33E94 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFX4Q33E94 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.61□□□□□ -1.83
RFX4Q33E94 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFX4Q33E94 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
RFX4Q33E94 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFX4Q33E94 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFX4Q33E94 U3.22-201ENST00000391120 215 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
RFX4Q33E94 AL391417.1-201ENST00000404100 426 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AL353692.2-201ENST00000407054 335 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.61□□□□□ -1.83
RFX4Q33E94 AL159169.1-201ENST00000421119 127 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AC023141.6-201ENST00000429418 337 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AL353093.1-201ENST00000441292 436 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.61□□□□□ -1.83
RFX4Q33E94 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.61□□□□□ -1.83
RFX4Q33E94 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.61□□□□□ -1.83
RFX4Q33E94 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC3.61□□□□□ -1.83
RFX4Q33E94 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.61□□□□□ -1.83
RFX4Q33E94 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.61□□□□□ -1.83
RFX4Q33E94 RNU7-170P-201ENST00000459303 61 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 RN7SL459P-201ENST00000481078 302 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 TRBV12-2-201ENST00000489763 344 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AC026784.1-201ENST00000507986 352 ntBASIC3.61□□□□□ -1.83
RFX4Q33E94 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms