Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AL589826.1-201ENST00000340697 249 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 MIR200C-201ENST00000384980 68 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 RNA5SP372-201ENST00000390836 115 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC007066.1-201ENST00000392902 381 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 RPS6P12-201ENST00000432491 726 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 RANP8-201ENST00000444720 713 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC005008.1-201ENST00000456151 612 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC006511.1-201ENST00000470614 315 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC025554.1-201ENST00000505641 188 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC024560.2-201ENST00000507981 1497 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC034244.2-201ENST00000514668 858 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 RNU6-889P-201ENST00000517189 103 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC090281.1-201ENST00000523019 276 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AP002001.2-201ENST00000529025 1469 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 MIMT1-201ENST00000597105 1050 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AL359715.4-201ENST00000606629 1436 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AL021368.1-201ENST00000607490 540 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AL031666.3-201ENST00000609320 1006 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC104307.1-201ENST00000616142 196 ntBASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.59□□□□□ -1.67
SHROOM1Q2M3G4 AC010300.1-201ENST00000600671 5134 ntBASIC4.59□□□□□ -1.68
SHROOM1Q2M3G4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHROOM1Q2M3G4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.68
SHROOM1Q2M3G4 AC027290.2-201ENST00000623210 18662 ntBASIC4.59□□□□□ -1.68
SHROOM1Q2M3G4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SHROOM1Q2M3G4 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 SNORA63.1-201ENST00000362493 131 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 RNU1-87P-201ENST00000363727 170 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 HDGFP1-201ENST00000405943 252 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 RPL23AP48-201ENST00000406913 488 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 HLA-N-201ENST00000437516 135 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC083863.1-201ENST00000438811 231 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AL353898.1-201ENST00000444055 238 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 TPMTP4-201ENST00000450749 678 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 FGF7P3-201ENST00000454645 303 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 UBDP1-202ENST00000457888 382 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 RPL21P71-201ENST00000465598 459 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC026403.1-201ENST00000518938 295 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC022695.1-201ENST00000522089 237 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 CYCSP30-201ENST00000546447 172 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC083899.3-201ENST00000603413 594 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 SNORA51-201ENST00000606420 132 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC015802.5-201ENST00000607478 399 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 MIR7702-201ENST00000621931 59 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC009093.8-201ENST00000641769 292 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AL163152.1-201ENST00000642001 374 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 AC011266.1-201ENST00000624119 3569 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 RNF6P1-201ENST00000444889 1784 ntBASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
SHROOM1Q2M3G4 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 MIR449B-201ENST00000384995 97 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 RPL21P17-201ENST00000397467 475 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 RNA5SP146-201ENST00000410743 123 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 SNORA57.3-201ENST00000411095 141 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 MTND2P15-201ENST00000418575 892 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 OR2X1P-201ENST00000421144 687 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 FAM204CP-201ENST00000424489 642 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 CYCSP43-201ENST00000438233 310 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 CYCSP53-201ENST00000455540 265 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC006517.1-201ENST00000480485 328 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.57□□□□□ -1.68
SHROOM1Q2M3G4 AC026726.1-201ENST00000512859 601 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms