Protein–RNA interactions for Protein: Q13698

CACNA1S, Voltage-dependent L-type calcium channel subunit alpha-1S, humanhuman

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1SQ13698 OR10D4P-201ENST00000525892 951 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.38□□□□□ -1.71
CACNA1SQ13698 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.38□□□□□ -1.71
CACNA1SQ13698 AC006840.1-201ENST00000623069 542 ntBASIC4.38□□□□□ -1.71
CACNA1SQ13698 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
CACNA1SQ13698 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CACNA1SQ13698 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
CACNA1SQ13698 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CACNA1SQ13698 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 OR5AW1P-201ENST00000426334 1006 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 AL589765.3-201ENST00000446084 462 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 AC080014.1-201ENST00000496877 1201 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 PRELID3BP6-201ENST00000503839 571 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 FTH1P9-201ENST00000513251 355 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 RNA5SP341-201ENST00000516261 117 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 AL162274.2-201ENST00000614406 332 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 AC074276.2-201ENST00000619891 348 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 CR392039.4-201ENST00000624968 501 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
CACNA1SQ13698 NDUFB1P1-201ENST00000435191 180 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 MTND6P32-201ENST00000457611 483 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 AP003392.5-201ENST00000607857 415 ntBASIC4.37□□□□□ -1.71
CACNA1SQ13698 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.37□□□□□ -1.71
CACNA1SQ13698 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1SQ13698 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1SQ13698 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1SQ13698 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1SQ13698 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 AC234772.1-201ENST00000377927 937 ntBASIC4.36□□□□□ -1.71
CACNA1SQ13698 JKAMPP1-201ENST00000413804 919 ntBASIC4.36□□□□□ -1.71
CACNA1SQ13698 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 UBE2NP1-201ENST00000545592 458 ntBASIC4.36□□□□□ -1.71
CACNA1SQ13698 MIR5004-201ENST00000579078 107 ntBASIC4.36□□□□□ -1.71
CACNA1SQ13698 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC4.36□□□□□ -1.71
CACNA1SQ13698 AC084036.1-201ENST00000609190 508 ntBASIC4.36□□□□□ -1.71
CACNA1SQ13698 AC079298.2-201ENST00000623885 459 ntBASIC4.36□□□□□ -1.71
CACNA1SQ13698 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CACNA1SQ13698 XKRY2-202ENST00000623874 1581 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 XKRY-202ENST00000624960 1581 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 RNA5SP39-201ENST00000411245 120 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 AC063979.1-201ENST00000415539 377 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 NANOGP6-201ENST00000429190 847 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 MOB1AP1-201ENST00000430903 535 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 MYL12AP1-201ENST00000518490 515 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 MIR4672-201ENST00000583126 81 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 KLKP1-201ENST00000595979 403 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 AL451049.1-201ENST00000608672 497 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1SQ13698 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1SQ13698 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1SQ13698 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1SQ13698 RNA5SP104-201ENST00000410989 118 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 USP12PY-201ENST00000427677 1064 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
CACNA1SQ13698 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 AP006245.1-201ENST00000522549 120 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.35□□□□□ -1.71
CACNA1SQ13698 AC005476.1-201ENST00000554427 397 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 EIF4BP1-201ENST00000554881 351 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 ATP5A1P2-202ENST00000616464 443 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 AC110801.1-201ENST00000623590 212 ntBASIC4.35□□□□□ -1.71
CACNA1SQ13698 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1SQ13698 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CACNA1SQ13698 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms