Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CDK3Q00526 CYP1D1P-201ENST00000416662 1433 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 SGO1P1-201ENST00000603525 1447 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDK3Q00526 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 AC009951.1-201ENST00000623674 2614 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 BTBD10P1-201ENST00000549824 1352 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 EOGT-210ENST00000615922 1931 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK3Q00526 RNA5SP175-201ENST00000364275 119 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 MIR16-1-201ENST00000385271 89 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 MTCO1P56-201ENST00000401674 224 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 AL512430.2-201ENST00000406786 339 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 NRBF2P2-201ENST00000413087 861 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 PAICSP7-201ENST00000419829 962 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK3Q00526 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.29□□□□□ -1.72
CDK3Q00526 NUTF2P3-201ENST00000448540 384 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK3Q00526 AC009963.2-201ENST00000453431 138 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK3Q00526 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CDK3Q00526 AC010683.1-201ENST00000473673 378 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK3Q00526 RPL35P6-201ENST00000490024 372 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 RN7SL691P-201ENST00000494487 301 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 RPL21P131-201ENST00000497298 483 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK3Q00526 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK3Q00526 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK3Q00526 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.29□□□□□ -1.72
CDK3Q00526 DEFB130C-202ENST00000530001 230 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.29□□□□□ -1.72
CDK3Q00526 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.29□□□□□ -1.72
CDK3Q00526 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.29□□□□□ -1.72
CDK3Q00526 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 AC044913.1-201ENST00000557200 430 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 RPL23AP97-201ENST00000568955 471 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 MIR4716-201ENST00000579628 84 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 AC011477.5-201ENST00000586571 259 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 AC109454.4-201ENST00000623411 649 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 MIR3653-201ENST00000625572 110 ntBASIC4.29□□□□□ -1.72
CDK3Q00526 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CDK3Q00526 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.29□□□□□ -1.72
CDK3Q00526 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CDK3Q00526 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CDK3Q00526 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
CDK3Q00526 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CDK3Q00526 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.28□□□□□ -1.72
CDK3Q00526 SFR1P1-201ENST00000403720 688 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AL078604.1-201ENST00000404609 466 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 RN7SKP199-201ENST00000410325 305 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 RNU6-575P-201ENST00000411326 105 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 OR51A3P-201ENST00000413596 924 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.28□□□□□ -1.72
CDK3Q00526 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.28□□□□□ -1.72
CDK3Q00526 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.28□□□□□ -1.72
CDK3Q00526 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AL512326.1-201ENST00000443050 721 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
CDK3Q00526 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CDK3Q00526 AC105137.1-201ENST00000484355 562 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 AC093267.1-201ENST00000489176 961 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 FTH1P24-201ENST00000503502 462 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CDK3Q00526 AC108475.1-201ENST00000507880 950 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC4.28□□□□□ -1.72
CDK3Q00526 AC010460.2-201ENST00000509054 677 ntBASIC4.28□□□□□ -1.72
CDK3Q00526 PARP4P3-201ENST00000510265 317 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms