Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.48□□□□□ -1.53
YBX1P67809 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 AC138915.3-201ENST00000562908 1389 ntBASIC5.48□□□□□ -1.53
YBX1P67809 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 OR4A15-201ENST00000314706 1035 ntBASIC5.48□□□□□ -1.53
YBX1P67809 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 Y_RNA.25-201ENST00000362528 102 ntBASIC5.48□□□□□ -1.53
YBX1P67809 RN7SKP145-201ENST00000363291 303 ntBASIC5.48□□□□□ -1.53
YBX1P67809 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
YBX1P67809 RNU1-136P-201ENST00000384181 164 ntBASIC5.48□□□□□ -1.53
YBX1P67809 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 AC096921.1-201ENST00000411661 375 ntBASIC5.48□□□□□ -1.53
YBX1P67809 RSU1P3-201ENST00000412878 835 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 JKAMPP1-201ENST00000413804 919 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AL139128.1-201ENST00000413921 941 ntBASIC5.48□□□□□ -1.53
YBX1P67809 HMGB3P20-201ENST00000417997 600 ntBASIC5.48□□□□□ -1.53
YBX1P67809 ISCA1P6-201ENST00000427740 390 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AC073335.1-201ENST00000427776 363 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 RPL7P59-201ENST00000447700 943 ntBASIC5.48□□□□□ -1.53
YBX1P67809 RPL26P28-201ENST00000451325 435 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 AC023598.1-201ENST00000472521 361 ntBASIC5.48□□□□□ -1.53
YBX1P67809 SNRPCP3-201ENST00000474888 476 ntBASIC5.48□□□□□ -1.53
YBX1P67809 RN7SL570P-201ENST00000484405 292 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AC007182.2-201ENST00000489251 402 ntBASIC5.48□□□□□ -1.53
YBX1P67809 EIF3LP3-201ENST00000495197 822 ntBASIC5.48□□□□□ -1.53
YBX1P67809 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 DEFB131D-201ENST00000526803 184 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AC013828.2-201ENST00000532487 235 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AC137627.1-201ENST00000545761 289 ntBASIC5.48□□□□□ -1.53
YBX1P67809 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 HIF1AP1-201ENST00000553642 175 ntBASIC5.48□□□□□ -1.53
YBX1P67809 RPL21P5-201ENST00000554662 472 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.48□□□□□ -1.53
YBX1P67809 MIR3682-201ENST00000581338 84 ntBASIC5.48□□□□□ -1.53
YBX1P67809 MIR4260-201ENST00000583107 67 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.48□□□□□ -1.53
YBX1P67809 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC5.48□□□□□ -1.53
YBX1P67809 RPL12P25-202ENST00000598100 674 ntBASIC5.48□□□□□ -1.53
YBX1P67809 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.48□□□□□ -1.53
YBX1P67809 AP004247.3-201ENST00000608682 624 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AL365204.3-201ENST00000612448 685 ntBASIC5.48□□□□□ -1.53
YBX1P67809 RN7SL787P-201ENST00000613000 284 ntBASIC5.48□□□□□ -1.53
YBX1P67809 AC234782.5-201ENST00000617723 324 ntBASIC5.48□□□□□ -1.53
YBX1P67809 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC5.48□□□□□ -1.53
YBX1P67809 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.48□□□□□ -1.53
YBX1P67809 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 PWAR1-201ENST00000624188 2414 ntBASIC5.48□□□□□ -1.53
YBX1P67809 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 AC007342.5-201ENST00000571340 2142 ntBASIC5.48□□□□□ -1.53
YBX1P67809 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.48□□□□□ -1.53
YBX1P67809 CCT4P2-201ENST00000233836 1548 ntBASIC5.48□□□□□ -1.53
YBX1P67809 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
YBX1P67809 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
YBX1P67809 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
YBX1P67809 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YBX1P67809 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YBX1P67809 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
YBX1P67809 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
YBX1P67809 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
YBX1P67809 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
YBX1P67809 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.47□□□□□ -1.53
YBX1P67809 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YBX1P67809 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YBX1P67809 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.47□□□□□ -1.53
YBX1P67809 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.47□□□□□ -1.53
YBX1P67809 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
YBX1P67809 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
YBX1P67809 OR13C1P-202ENST00000641378 2919 ntBASIC5.47□□□□□ -1.53
YBX1P67809 RNA5SP30-201ENST00000365552 115 ntBASIC5.47□□□□□ -1.53
YBX1P67809 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
YBX1P67809 RNU6-878P-201ENST00000384578 110 ntBASIC5.47□□□□□ -1.53
YBX1P67809 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
YBX1P67809 SNRPEP2-201ENST00000397592 279 ntBASIC5.47□□□□□ -1.53
YBX1P67809 PEX12P1-201ENST00000400284 1048 ntBASIC5.47□□□□□ -1.53
YBX1P67809 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.47□□□□□ -1.53
YBX1P67809 RNU6-195P-201ENST00000411352 109 ntBASIC5.47□□□□□ -1.53
YBX1P67809 RPL23AP4-201ENST00000427757 463 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.8 ms