Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 OR5BE1P-202ENST00000641168 1176 ntBASIC3.29□□□□□ -1.88
UBA52P62987 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.29□□□□□ -1.88
UBA52P62987 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
UBA52P62987 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
UBA52P62987 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.29□□□□□ -1.88
UBA52P62987 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
UBA52P62987 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.29□□□□□ -1.88
UBA52P62987 AC066616.2-201ENST00000559334 1481 ntBASIC3.28□□□□□ -1.88
UBA52P62987 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
UBA52P62987 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBA52P62987 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
UBA52P62987 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.28□□□□□ -1.88
UBA52P62987 SNORA60-201ENST00000362396 134 ntBASIC3.28□□□□□ -1.88
UBA52P62987 SNORA63.1-201ENST00000362493 131 ntBASIC3.28□□□□□ -1.88
UBA52P62987 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.28□□□□□ -1.88
UBA52P62987 RPL17P50-201ENST00000396131 546 ntBASIC3.28□□□□□ -1.88
UBA52P62987 RPL23AP83-201ENST00000434984 473 ntBASIC3.28□□□□□ -1.88
UBA52P62987 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.28□□□□□ -1.88
UBA52P62987 RPL12P46-201ENST00000436610 195 ntBASIC3.28□□□□□ -1.88
UBA52P62987 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.28□□□□□ -1.88
UBA52P62987 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.28□□□□□ -1.88
UBA52P62987 RPL7P24-201ENST00000493052 752 ntBASIC3.28□□□□□ -1.88
UBA52P62987 PCBP2P3-201ENST00000509726 843 ntBASIC3.28□□□□□ -1.88
UBA52P62987 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.28□□□□□ -1.88
UBA52P62987 RN7SKP157-201ENST00000516174 282 ntBASIC3.28□□□□□ -1.88
UBA52P62987 RN7SKP209-201ENST00000516888 304 ntBASIC3.28□□□□□ -1.88
UBA52P62987 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.28□□□□□ -1.88
UBA52P62987 AC012417.1-201ENST00000582307 1039 ntBASIC3.28□□□□□ -1.88
UBA52P62987 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
UBA52P62987 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.28□□□□□ -1.88
UBA52P62987 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.28□□□□□ -1.88
UBA52P62987 SNORA51-201ENST00000606420 132 ntBASIC3.28□□□□□ -1.88
UBA52P62987 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.28□□□□□ -1.88
UBA52P62987 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBA52P62987 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBA52P62987 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
UBA52P62987 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
UBA52P62987 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBA52P62987 RNA5SP124-201ENST00000362739 110 ntBASIC3.27□□□□□ -1.89
UBA52P62987 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBA52P62987 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBA52P62987 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC3.27□□□□□ -1.89
UBA52P62987 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.27□□□□□ -1.89
UBA52P62987 AC006011.1-201ENST00000442758 349 ntBASIC3.27□□□□□ -1.89
UBA52P62987 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.27□□□□□ -1.89
UBA52P62987 RPS4XP4-201ENST00000443195 763 ntBASIC3.27□□□□□ -1.89
UBA52P62987 NOTCH2P1-201ENST00000443481 624 ntBASIC3.27□□□□□ -1.89
UBA52P62987 RPL6P5-201ENST00000445678 828 ntBASIC3.27□□□□□ -1.89
UBA52P62987 TRBV8-2-201ENST00000475637 270 ntBASIC3.27□□□□□ -1.89
UBA52P62987 ACTR3P3-201ENST00000480448 893 ntBASIC3.27□□□□□ -1.89
UBA52P62987 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.27□□□□□ -1.89
UBA52P62987 FTH1P9-201ENST00000513251 355 ntBASIC3.27□□□□□ -1.89
UBA52P62987 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 RN7SKP141-201ENST00000516167 338 ntBASIC3.27□□□□□ -1.89
UBA52P62987 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.27□□□□□ -1.89
UBA52P62987 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.27□□□□□ -1.89
UBA52P62987 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.27□□□□□ -1.89
UBA52P62987 MIR4738-201ENST00000579134 87 ntBASIC3.27□□□□□ -1.89
UBA52P62987 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.27□□□□□ -1.89
UBA52P62987 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.27□□□□□ -1.89
UBA52P62987 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.27□□□□□ -1.89
UBA52P62987 AL390816.3-201ENST00000604527 1066 ntBASIC3.27□□□□□ -1.89
UBA52P62987 AC069200.1-201ENST00000609511 323 ntBASIC3.27□□□□□ -1.89
UBA52P62987 AL121772.2-201ENST00000614331 297 ntBASIC3.27□□□□□ -1.89
UBA52P62987 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
UBA52P62987 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.27□□□□□ -1.89
UBA52P62987 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
UBA52P62987 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
UBA52P62987 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
UBA52P62987 MAPK10-372ENST00000641954 3413 ntBASIC3.26□□□□□ -1.89
UBA52P62987 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
UBA52P62987 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBA52P62987 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.26□□□□□ -1.89
UBA52P62987 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
UBA52P62987 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBA52P62987 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
UBA52P62987 RNU6-213P-201ENST00000384051 104 ntBASIC3.26□□□□□ -1.89
UBA52P62987 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.26□□□□□ -1.89
UBA52P62987 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.26□□□□□ -1.89
UBA52P62987 AC099336.2-201ENST00000422457 254 ntBASIC3.26□□□□□ -1.89
UBA52P62987 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
UBA52P62987 AC013410.1-201ENST00000436223 1232 ntBASIC3.26□□□□□ -1.89
UBA52P62987 USP9YP7-201ENST00000436723 430 ntBASIC3.26□□□□□ -1.89
UBA52P62987 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.26□□□□□ -1.89
UBA52P62987 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.26□□□□□ -1.89
UBA52P62987 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.26□□□□□ -1.89
UBA52P62987 USP9YP32-201ENST00000452432 430 ntBASIC3.26□□□□□ -1.89
UBA52P62987 SNRPGP5-201ENST00000456003 220 ntBASIC3.26□□□□□ -1.89
UBA52P62987 RPL6P9-201ENST00000466502 859 ntBASIC3.26□□□□□ -1.89
UBA52P62987 RPL7P49-201ENST00000471402 708 ntBASIC3.26□□□□□ -1.89
UBA52P62987 AP000893.1-201ENST00000474462 794 ntBASIC3.26□□□□□ -1.89
UBA52P62987 RPS4XP15-201ENST00000489210 795 ntBASIC3.26□□□□□ -1.89
UBA52P62987 RPL29P14-201ENST00000495837 428 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms