Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 AC006960.1-201ENST00000419980 153 ntBASIC2.2□□□□□ -2.06
RPS28P62857 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC2.2□□□□□ -2.06
RPS28P62857 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC2.2□□□□□ -2.06
RPS28P62857 SCP2-206ENST00000430330 938 ntTSL 2 BASIC2.2□□□□□ -2.06
RPS28P62857 AL132765.1-201ENST00000434165 553 ntBASIC2.2□□□□□ -2.06
RPS28P62857 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC2.2□□□□□ -2.06
RPS28P62857 ARMC4P1-201ENST00000438905 707 ntBASIC2.2□□□□□ -2.06
RPS28P62857 NOTCH2P1-201ENST00000443481 624 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AL590004.3-202ENST00000445883 451 ntBASIC2.2□□□□□ -2.06
RPS28P62857 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC2.2□□□□□ -2.06
RPS28P62857 AC012671.1-201ENST00000451912 203 ntBASIC2.2□□□□□ -2.06
RPS28P62857 RPL7P24-201ENST00000493052 752 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.2□□□□□ -2.06
RPS28P62857 RPL37P25-201ENST00000507308 276 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 AC114781.3-201ENST00000512083 142 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC026412.2-201ENST00000512270 1075 ntBASIC2.2□□□□□ -2.06
RPS28P62857 RN7SKP96-201ENST00000516948 297 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
RPS28P62857 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 ARL1-211ENST00000551828 776 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 POLR2KP1-201ENST00000553226 168 ntBASIC2.2□□□□□ -2.06
RPS28P62857 SEC11A-203ENST00000558134 971 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 HMGN1P26-201ENST00000558737 303 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC2.2□□□□□ -2.06
RPS28P62857 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 MIR4327-201ENST00000581194 85 ntBASIC2.2□□□□□ -2.06
RPS28P62857 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 AC090236.2-201ENST00000587933 1101 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 GLUD1P4-201ENST00000590914 418 ntBASIC2.2□□□□□ -2.06
RPS28P62857 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC2.2□□□□□ -2.06
RPS28P62857 DUXAP3-201ENST00000603616 594 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AL137843.1-201ENST00000605078 385 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC073137.1-201ENST00000605636 634 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AC024560.3-201ENST00000608482 349 ntBASIC2.2□□□□□ -2.06
RPS28P62857 AL683826.1-201ENST00000624104 627 ntBASIC2.2□□□□□ -2.06
RPS28P62857 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 FO624990.1-201ENST00000636373 85 ntBASIC2.2□□□□□ -2.06
RPS28P62857 ZNF734P-201ENST00000419494 1534 ntBASIC2.2□□□□□ -2.06
RPS28P62857 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC2.2□□□□□ -2.06
RPS28P62857 SLC9B1P1-201ENST00000331172 1337 ntBASIC2.19□□□□□ -2.06
RPS28P62857 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 CUL1P1-201ENST00000509510 2425 ntBASIC2.19□□□□□ -2.06
RPS28P62857 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RPS28P62857 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 CRYGA-201ENST00000304502 609 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 AC107977.1-201ENST00000355745 939 ntBASIC2.19□□□□□ -2.06
RPS28P62857 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
RPS28P62857 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 RNA5SP263-201ENST00000363376 128 ntBASIC2.19□□□□□ -2.06
RPS28P62857 U3.6-201ENST00000363622 211 ntBASIC2.19□□□□□ -2.06
RPS28P62857 RN7SKP1-201ENST00000365525 307 ntBASIC2.19□□□□□ -2.06
RPS28P62857 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 Y_RNA.493-201ENST00000384422 102 ntBASIC2.19□□□□□ -2.06
RPS28P62857 MIR627-201ENST00000384979 97 ntBASIC2.19□□□□□ -2.06
RPS28P62857 RPL36A-202ENST00000392994 691 ntTSL 2 BASIC2.19□□□□□ -2.06
RPS28P62857 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
RPS28P62857 ARF4P3-201ENST00000397387 509 ntBASIC2.19□□□□□ -2.06
RPS28P62857 MIR1251-201ENST00000408552 70 ntBASIC2.19□□□□□ -2.06
RPS28P62857 RNA5SP317-201ENST00000410176 116 ntBASIC2.19□□□□□ -2.06
RPS28P62857 RNA5SP311-201ENST00000411290 116 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AL139135.1-201ENST00000412675 209 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AL024497.1-201ENST00000412954 631 ntTSL 5 BASIC2.19□□□□□ -2.06
RPS28P62857 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC2.19□□□□□ -2.06
RPS28P62857 AK4P4-201ENST00000419465 646 ntBASIC2.19□□□□□ -2.06
RPS28P62857 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC2.19□□□□□ -2.06
RPS28P62857 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 EIF1P3-201ENST00000423841 334 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 RPL23AP19-201ENST00000436229 369 ntBASIC2.19□□□□□ -2.06
RPS28P62857 MUPP-201ENST00000438111 566 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AL513321.1-201ENST00000441175 761 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC105399.1-202ENST00000447303 205 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AL590664.1-201ENST00000448065 339 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AC005077.1-201ENST00000449226 375 ntBASIC2.19□□□□□ -2.06
RPS28P62857 TCEA1P1-201ENST00000449716 880 ntBASIC2.19□□□□□ -2.06
RPS28P62857 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.19□□□□□ -2.06
RPS28P62857 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC2.19□□□□□ -2.06
RPS28P62857 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 RN7SL98P-201ENST00000462271 300 ntBASIC2.19□□□□□ -2.06
RPS28P62857 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.19□□□□□ -2.06
RPS28P62857 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
RPS28P62857 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.19□□□□□ -2.06
RPS28P62857 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.19□□□□□ -2.06
RPS28P62857 AC010625.1-201ENST00000511296 403 ntBASIC2.19□□□□□ -2.06
RPS28P62857 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms