Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.77□□□□□ -1.81
LIM2P55344 NUTF2P7-201ENST00000453086 375 ntBASIC3.77□□□□□ -1.81
LIM2P55344 VN1R40P-201ENST00000455196 941 ntBASIC3.77□□□□□ -1.81
LIM2P55344 APOOP2-201ENST00000461561 539 ntBASIC3.77□□□□□ -1.81
LIM2P55344 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.77□□□□□ -1.81
LIM2P55344 RPS6P4-201ENST00000494693 758 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.77□□□□□ -1.81
LIM2P55344 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.77□□□□□ -1.81
LIM2P55344 AC133963.2-201ENST00000513686 578 ntBASIC3.77□□□□□ -1.81
LIM2P55344 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.77□□□□□ -1.81
LIM2P55344 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LIM2P55344 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
LIM2P55344 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.77□□□□□ -1.81
LIM2P55344 GNRHR2P1-201ENST00000555315 631 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AC093510.2-201ENST00000562820 896 ntBASIC3.77□□□□□ -1.81
LIM2P55344 CSNK1A1P1-202ENST00000563423 981 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AC007224.1-201ENST00000564410 144 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AL360157.1-201ENST00000565962 87 ntBASIC3.77□□□□□ -1.81
LIM2P55344 MIR4716-201ENST00000579628 84 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.77□□□□□ -1.81
LIM2P55344 AC092653.1-201ENST00000608509 531 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AP000255.1-201ENST00000610276 676 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AC084824.5-201ENST00000612009 413 ntBASIC3.77□□□□□ -1.81
LIM2P55344 U6.48-201ENST00000618523 106 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AC124312.6-202ENST00000623624 418 ntBASIC3.77□□□□□ -1.81
LIM2P55344 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC3.77□□□□□ -1.81
LIM2P55344 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.77□□□□□ -1.81
LIM2P55344 AC116563.2-201ENST00000624751 535 ntBASIC3.77□□□□□ -1.81
LIM2P55344 RNA5SP196-201ENST00000625967 102 ntBASIC3.77□□□□□ -1.81
LIM2P55344 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.77□□□□□ -1.81
LIM2P55344 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.77□□□□□ -1.81
LIM2P55344 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.76□□□□□ -1.81
LIM2P55344 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 AC114546.3-201ENST00000623582 1734 ntBASIC3.76□□□□□ -1.81
LIM2P55344 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.76□□□□□ -1.81
LIM2P55344 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 HMGB3P31-201ENST00000413333 595 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.76□□□□□ -1.81
LIM2P55344 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.76□□□□□ -1.81
LIM2P55344 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 AL391219.1-201ENST00000422570 483 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 NIPA2P1-201ENST00000426223 976 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.76□□□□□ -1.81
LIM2P55344 HIGD1AP4-201ENST00000430194 280 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AL117339.2-201ENST00000430475 180 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 HSFY6P-201ENST00000445573 403 ntBASIC3.76□□□□□ -1.81
LIM2P55344 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AL162151.2-201ENST00000448875 158 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC239809.1-201ENST00000450470 217 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 RPS6P2-201ENST00000454208 705 ntBASIC3.76□□□□□ -1.81
LIM2P55344 RPL23AP71-201ENST00000470966 469 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC103987.1-201ENST00000473394 348 ntBASIC3.76□□□□□ -1.81
LIM2P55344 RPL21P47-201ENST00000483696 477 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC110792.1-201ENST00000491826 472 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC108064.1-201ENST00000513791 460 ntBASIC3.76□□□□□ -1.81
LIM2P55344 SNORD116-26-201ENST00000516006 96 ntBASIC3.76□□□□□ -1.81
LIM2P55344 MIR2116-201ENST00000517221 80 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.76□□□□□ -1.81
LIM2P55344 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.76□□□□□ -1.81
LIM2P55344 OR5AK3P-201ENST00000527486 1297 ntBASIC3.76□□□□□ -1.81
LIM2P55344 OR4R2P-201ENST00000530815 597 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 AC068446.3-201ENST00000555285 382 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AL121594.4-201ENST00000556211 1196 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC084757.1-201ENST00000559987 490 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 AC027104.1-201ENST00000563702 681 ntBASIC3.76□□□□□ -1.81
LIM2P55344 MTND4LP24-201ENST00000572277 291 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC3.76□□□□□ -1.81
LIM2P55344 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.76□□□□□ -1.81
LIM2P55344 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.76□□□□□ -1.81
LIM2P55344 AC020910.2-201ENST00000603635 610 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.76□□□□□ -1.81
LIM2P55344 MIR8084-201ENST00000614105 89 ntBASIC3.76□□□□□ -1.81
LIM2P55344 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.76□□□□□ -1.81
LIM2P55344 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.76□□□□□ -1.81
LIM2P55344 CDRT1-208ENST00000630868 794 ntBASIC3.76□□□□□ -1.81
LIM2P55344 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 CYP1D1P-201ENST00000416662 1433 ntBASIC3.76□□□□□ -1.81
LIM2P55344 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
LIM2P55344 AC017007.4-201ENST00000503353 1352 ntBASIC3.76□□□□□ -1.81
LIM2P55344 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
LIM2P55344 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.75□□□□□ -1.81
LIM2P55344 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 HSPA8P19-201ENST00000505359 1517 ntBASIC3.75□□□□□ -1.81
LIM2P55344 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
LIM2P55344 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.75□□□□□ -1.81
LIM2P55344 MFSD8-213ENST00000641134 1327 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms