Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 RNU6-157P-201ENST00000383957 107 ntBASIC5.04□□□□□ -1.6
COPAP53621 RNU6-1300P-201ENST00000391046 108 ntBASIC5.04□□□□□ -1.6
COPAP53621 SKINT1L-201ENST00000401057 817 ntBASIC5.04□□□□□ -1.6
COPAP53621 AL035079.1-201ENST00000405210 287 ntBASIC5.04□□□□□ -1.6
COPAP53621 AL133264.1-201ENST00000407157 562 ntBASIC5.04□□□□□ -1.6
COPAP53621 RNA5SP113-201ENST00000410486 84 ntBASIC5.04□□□□□ -1.6
COPAP53621 MTND4P22-201ENST00000413116 1169 ntBASIC5.04□□□□□ -1.6
COPAP53621 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 IPMKP1-201ENST00000425988 855 ntBASIC5.04□□□□□ -1.6
COPAP53621 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 UBE2V1P1-201ENST00000430836 445 ntBASIC5.04□□□□□ -1.6
COPAP53621 MTND1P32-201ENST00000433043 938 ntBASIC5.04□□□□□ -1.6
COPAP53621 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC5.04□□□□□ -1.6
COPAP53621 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 RPS29P9-201ENST00000440360 171 ntBASIC5.04□□□□□ -1.6
COPAP53621 MTND3P1-201ENST00000441336 220 ntBASIC5.04□□□□□ -1.6
COPAP53621 RPL36AP15-201ENST00000444514 266 ntBASIC5.04□□□□□ -1.6
COPAP53621 MTCO2P25-201ENST00000447065 681 ntBASIC5.04□□□□□ -1.6
COPAP53621 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 AC009220.1-201ENST00000451614 275 ntBASIC5.04□□□□□ -1.6
COPAP53621 RPL21P134-201ENST00000453468 483 ntBASIC5.04□□□□□ -1.6
COPAP53621 RFC5P1-201ENST00000454419 874 ntBASIC5.04□□□□□ -1.6
COPAP53621 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 MTCYBP16-201ENST00000509187 1129 ntBASIC5.04□□□□□ -1.6
COPAP53621 OR51K1P-201ENST00000510214 950 ntBASIC5.04□□□□□ -1.6
COPAP53621 RNU6-1129P-201ENST00000515964 104 ntBASIC5.04□□□□□ -1.6
COPAP53621 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 AC005832.3-201ENST00000537929 631 ntBASIC5.04□□□□□ -1.6
COPAP53621 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 GTF2IP8-201ENST00000560687 584 ntBASIC5.04□□□□□ -1.6
COPAP53621 AC079171.1-201ENST00000568788 914 ntBASIC5.04□□□□□ -1.6
COPAP53621 AC091042.1-201ENST00000579213 173 ntBASIC5.04□□□□□ -1.6
COPAP53621 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 AC234771.5-201ENST00000600161 514 ntBASIC5.04□□□□□ -1.6
COPAP53621 AL390838.2-201ENST00000602394 274 ntBASIC5.04□□□□□ -1.6
COPAP53621 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.04□□□□□ -1.6
COPAP53621 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.04□□□□□ -1.6
COPAP53621 AL158042.1-201ENST00000605338 460 ntBASIC5.04□□□□□ -1.6
COPAP53621 AL391358.1-201ENST00000605342 190 ntBASIC5.04□□□□□ -1.6
COPAP53621 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.04□□□□□ -1.6
COPAP53621 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.04□□□□□ -1.6
COPAP53621 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 AL603755.1-201ENST00000619504 163 ntBASIC5.04□□□□□ -1.6
COPAP53621 MIR6810-201ENST00000622701 70 ntBASIC5.04□□□□□ -1.6
COPAP53621 AC067852.7-201ENST00000623270 535 ntBASIC5.04□□□□□ -1.6
COPAP53621 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
COPAP53621 AL031119.1-201ENST00000404707 1879 ntBASIC5.04□□□□□ -1.6
COPAP53621 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
COPAP53621 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 AP000542.2-201ENST00000623199 6179 ntBASIC5.04□□□□□ -1.6
COPAP53621 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
COPAP53621 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
COPAP53621 SAMMSON-226ENST00000642089 1582 ntBASIC5.04□□□□□ -1.6
COPAP53621 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COPAP53621 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPAP53621 AL513185.3-201ENST00000433335 1300 ntBASIC5.03□□□□□ -1.6
COPAP53621 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPAP53621 OR14L1P-202ENST00000641545 3009 ntBASIC5.03□□□□□ -1.6
COPAP53621 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.03□□□□□ -1.6
COPAP53621 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.03□□□□□ -1.6
COPAP53621 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
COPAP53621 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPAP53621 RNU6-582P-201ENST00000362989 107 ntBASIC5.03□□□□□ -1.6
COPAP53621 RNU6-398P-201ENST00000384143 109 ntBASIC5.03□□□□□ -1.6
COPAP53621 RNU5A-2P-201ENST00000384337 116 ntBASIC5.03□□□□□ -1.6
COPAP53621 MIR141-201ENST00000384975 95 ntBASIC5.03□□□□□ -1.6
COPAP53621 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
COPAP53621 AC136624.1-201ENST00000400791 413 ntBASIC5.03□□□□□ -1.6
COPAP53621 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 RNA5SP80-201ENST00000410475 111 ntBASIC5.03□□□□□ -1.6
COPAP53621 AL161449.1-201ENST00000414531 1199 ntBASIC5.03□□□□□ -1.6
COPAP53621 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPAP53621 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPAP53621 AC004074.1-201ENST00000421810 1063 ntBASIC5.03□□□□□ -1.6
COPAP53621 RPL7P44-201ENST00000424827 742 ntBASIC5.03□□□□□ -1.6
COPAP53621 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC5.03□□□□□ -1.6
COPAP53621 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
COPAP53621 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.03□□□□□ -1.6
COPAP53621 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms