Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COPB1P53618 AC093311.1-201ENST00000506586 2021 ntBASIC4.99□□□□□ -1.61
COPB1P53618 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.99□□□□□ -1.61
COPB1P53618 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.99□□□□□ -1.61
COPB1P53618 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.98□□□□□ -1.61
COPB1P53618 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
COPB1P53618 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.98□□□□□ -1.61
COPB1P53618 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 Y_RNA.192-201ENST00000363977 102 ntBASIC4.98□□□□□ -1.61
COPB1P53618 RNU6-707P-201ENST00000364647 95 ntBASIC4.98□□□□□ -1.61
COPB1P53618 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COPB1P53618 Y_RNA.465-201ENST00000384293 102 ntBASIC4.98□□□□□ -1.61
COPB1P53618 RNU1-44P-201ENST00000384453 163 ntBASIC4.98□□□□□ -1.61
COPB1P53618 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
COPB1P53618 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.98□□□□□ -1.61
COPB1P53618 LINC01881-201ENST00000416103 412 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AC092017.2-201ENST00000427600 362 ntBASIC4.98□□□□□ -1.61
COPB1P53618 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.98□□□□□ -1.61
COPB1P53618 PSMD10P3-201ENST00000437000 448 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.98□□□□□ -1.61
COPB1P53618 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.98□□□□□ -1.61
COPB1P53618 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.98□□□□□ -1.61
COPB1P53618 MRPL42P4-201ENST00000453267 443 ntBASIC4.98□□□□□ -1.61
COPB1P53618 RPS3AP41-201ENST00000462701 778 ntBASIC4.98□□□□□ -1.61
COPB1P53618 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.98□□□□□ -1.61
COPB1P53618 CEACAMP10-202ENST00000495431 496 ntBASIC4.98□□□□□ -1.61
COPB1P53618 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.98□□□□□ -1.61
COPB1P53618 AC111000.2-201ENST00000507775 550 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AC007016.1-201ENST00000512110 244 ntBASIC4.98□□□□□ -1.61
COPB1P53618 MTND4LP31-201ENST00000514859 294 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AC023632.1-201ENST00000518463 375 ntBASIC4.98□□□□□ -1.61
COPB1P53618 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.98□□□□□ -1.61
COPB1P53618 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.98□□□□□ -1.61
COPB1P53618 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.98□□□□□ -1.61
COPB1P53618 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.98□□□□□ -1.61
COPB1P53618 BGLT3-201ENST00000564523 994 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AC002400.1-201ENST00000569310 726 ntBASIC4.98□□□□□ -1.61
COPB1P53618 MIR3912-201ENST00000577566 105 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC4.98□□□□□ -1.61
COPB1P53618 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.98□□□□□ -1.61
COPB1P53618 AC073091.2-201ENST00000603205 907 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.98□□□□□ -1.61
COPB1P53618 FAM25E-202ENST00000608562 189 ntBASIC4.98□□□□□ -1.61
COPB1P53618 MIR7154-201ENST00000620673 73 ntBASIC4.98□□□□□ -1.61
COPB1P53618 U3.53-201ENST00000628922 216 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AC087821.2-201ENST00000637086 450 ntBASIC4.98□□□□□ -1.61
COPB1P53618 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 AL445523.1-201ENST00000451184 1362 ntBASIC4.98□□□□□ -1.61
COPB1P53618 AL390862.1-201ENST00000635467 1469 ntBASIC4.98□□□□□ -1.61
COPB1P53618 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
COPB1P53618 AP005901.5-201ENST00000545779 1796 ntBASIC4.98□□□□□ -1.61
COPB1P53618 NXPH1-205ENST00000602349 1953 ntBASIC4.98□□□□□ -1.61
COPB1P53618 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.98□□□□□ -1.61
COPB1P53618 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.98□□□□□ -1.61
COPB1P53618 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPB1P53618 RBPJP2-201ENST00000618187 1444 ntBASIC4.97□□□□□ -1.61
COPB1P53618 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPB1P53618 KARSP3-201ENST00000571212 1504 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.97□□□□□ -1.61
COPB1P53618 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
COPB1P53618 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.97□□□□□ -1.61
COPB1P53618 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COPB1P53618 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.97□□□□□ -1.61
COPB1P53618 AC093775.1-201ENST00000624154 1868 ntBASIC4.97□□□□□ -1.61
COPB1P53618 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COPB1P53618 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.97□□□□□ -1.61
COPB1P53618 RNA5SP22-201ENST00000365393 109 ntBASIC4.97□□□□□ -1.61
COPB1P53618 SNORA51.8-201ENST00000384234 132 ntBASIC4.97□□□□□ -1.61
COPB1P53618 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
COPB1P53618 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPB1P53618 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
COPB1P53618 Z98745.1-201ENST00000402553 494 ntBASIC4.97□□□□□ -1.61
COPB1P53618 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.97□□□□□ -1.61
COPB1P53618 COX6B1P1-201ENST00000415962 213 ntBASIC4.97□□□□□ -1.61
COPB1P53618 HSFY4P-201ENST00000415994 1181 ntBASIC4.97□□□□□ -1.61
COPB1P53618 RAD23BP1-201ENST00000421404 1227 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AL593851.1-201ENST00000426171 157 ntBASIC4.97□□□□□ -1.61
COPB1P53618 RPP40P1-201ENST00000426762 456 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC104837.2-201ENST00000427236 424 ntBASIC4.97□□□□□ -1.61
COPB1P53618 CNOT7P1-201ENST00000429006 852 ntBASIC4.97□□□□□ -1.61
COPB1P53618 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.97□□□□□ -1.61
COPB1P53618 AL049745.1-201ENST00000433953 286 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AC005154.2-201ENST00000438110 379 ntBASIC4.97□□□□□ -1.61
COPB1P53618 UBE2D3P4-201ENST00000441973 436 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC4.97□□□□□ -1.61
COPB1P53618 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.97□□□□□ -1.61
COPB1P53618 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.97□□□□□ -1.61
COPB1P53618 HMGB1P48-201ENST00000446155 598 ntBASIC4.97□□□□□ -1.61
COPB1P53618 TPT1P13-201ENST00000449760 499 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AL591363.1-201ENST00000450091 483 ntBASIC4.97□□□□□ -1.61
COPB1P53618 RPS27AP8-201ENST00000452665 445 ntBASIC4.97□□□□□ -1.61
COPB1P53618 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms