Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSR1P43307 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.28□□□□□ -1.72
SSR1P43307 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSR1P43307 AC005261.4-201ENST00000600047 1385 ntBASIC4.28□□□□□ -1.72
SSR1P43307 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.28□□□□□ -1.72
SSR1P43307 FAM3C2-201ENST00000312214 681 ntBASIC4.28□□□□□ -1.72
SSR1P43307 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSR1P43307 RNA5SP366-201ENST00000365454 123 ntBASIC4.28□□□□□ -1.72
SSR1P43307 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.28□□□□□ -1.72
SSR1P43307 MIR153-1-201ENST00000384914 90 ntBASIC4.28□□□□□ -1.72
SSR1P43307 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.28□□□□□ -1.72
SSR1P43307 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.28□□□□□ -1.72
SSR1P43307 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.28□□□□□ -1.72
SSR1P43307 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.28□□□□□ -1.72
SSR1P43307 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.28□□□□□ -1.72
SSR1P43307 CYCSP42-201ENST00000450823 238 ntBASIC4.28□□□□□ -1.72
SSR1P43307 SLC31A1P1-201ENST00000451221 567 ntBASIC4.28□□□□□ -1.72
SSR1P43307 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.28□□□□□ -1.72
SSR1P43307 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.28□□□□□ -1.72
SSR1P43307 RPS23P1-201ENST00000491662 432 ntBASIC4.28□□□□□ -1.72
SSR1P43307 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.28□□□□□ -1.72
SSR1P43307 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.28□□□□□ -1.72
SSR1P43307 ACTR6P1-201ENST00000514311 1104 ntBASIC4.28□□□□□ -1.72
SSR1P43307 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.28□□□□□ -1.72
SSR1P43307 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.28□□□□□ -1.72
SSR1P43307 OR4U1P-201ENST00000554958 912 ntBASIC4.28□□□□□ -1.72
SSR1P43307 GNRHR2P1-201ENST00000555315 631 ntBASIC4.28□□□□□ -1.72
SSR1P43307 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.28□□□□□ -1.72
SSR1P43307 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.28□□□□□ -1.72
SSR1P43307 AC104785.1-201ENST00000603220 588 ntBASIC4.28□□□□□ -1.72
SSR1P43307 AC128687.2-201ENST00000609657 566 ntBASIC4.28□□□□□ -1.72
SSR1P43307 AL450489.1-201ENST00000612071 468 ntBASIC4.28□□□□□ -1.72
SSR1P43307 AC116563.2-201ENST00000624751 535 ntBASIC4.28□□□□□ -1.72
SSR1P43307 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.28□□□□□ -1.72
SSR1P43307 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SSR1P43307 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC4.28□□□□□ -1.72
SSR1P43307 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSR1P43307 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SSR1P43307 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.28□□□□□ -1.72
SSR1P43307 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SSR1P43307 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.28□□□□□ -1.73
SSR1P43307 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
SSR1P43307 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSR1P43307 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC4.27□□□□□ -1.73
SSR1P43307 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
SSR1P43307 RNU6-819P-201ENST00000364116 107 ntBASIC4.27□□□□□ -1.73
SSR1P43307 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSR1P43307 XKRYP4-201ENST00000414395 483 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSR1P43307 AC244453.4-201ENST00000419150 388 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.27□□□□□ -1.73
SSR1P43307 OR5BE1P-201ENST00000425977 939 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AL358472.1-201ENST00000431295 329 ntBASIC4.27□□□□□ -1.73
SSR1P43307 MTCO1P43-201ENST00000431831 488 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC4.27□□□□□ -1.73
SSR1P43307 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.27□□□□□ -1.73
SSR1P43307 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SSR1P43307 AL627224.1-201ENST00000448334 444 ntBASIC4.27□□□□□ -1.73
SSR1P43307 XKRYP5-201ENST00000449659 483 ntBASIC4.27□□□□□ -1.73
SSR1P43307 RPL7P1-201ENST00000468161 747 ntBASIC4.27□□□□□ -1.73
SSR1P43307 RPL7P9-201ENST00000468715 747 ntBASIC4.27□□□□□ -1.73
SSR1P43307 UQCRHP4-201ENST00000471686 272 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AC105137.1-201ENST00000484355 562 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.27□□□□□ -1.73
SSR1P43307 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.27□□□□□ -1.73
SSR1P43307 RPL12P22-201ENST00000519073 490 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.27□□□□□ -1.73
SSR1P43307 OR7E10P-201ENST00000526420 991 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC4.27□□□□□ -1.73
SSR1P43307 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.27□□□□□ -1.73
SSR1P43307 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
SSR1P43307 AC010198.2-201ENST00000550612 259 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.27□□□□□ -1.73
SSR1P43307 AC007599.1-201ENST00000568688 1174 ntBASIC4.27□□□□□ -1.73
SSR1P43307 MIR5096-201ENST00000583713 70 ntBASIC4.27□□□□□ -1.73
SSR1P43307 KPNA2P3-201ENST00000584190 848 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC4.27□□□□□ -1.73
SSR1P43307 AP003117.1-201ENST00000602771 554 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AC022387.2-201ENST00000604050 448 ntBASIC4.27□□□□□ -1.73
SSR1P43307 AC005156.1-201ENST00000613371 573 ntBASIC4.27□□□□□ -1.73
SSR1P43307 OR5BE1P-202ENST00000641168 1176 ntBASIC4.27□□□□□ -1.73
SSR1P43307 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.27□□□□□ -1.73
SSR1P43307 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.27□□□□□ -1.73
SSR1P43307 RNF6P1-201ENST00000444889 1784 ntBASIC4.27□□□□□ -1.73
SSR1P43307 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC4.26□□□□□ -1.73
SSR1P43307 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.26□□□□□ -1.73
SSR1P43307 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.26□□□□□ -1.73
SSR1P43307 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
SSR1P43307 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.26□□□□□ -1.73
SSR1P43307 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.26□□□□□ -1.73
SSR1P43307 MIR937-201ENST00000401271 86 ntBASIC4.26□□□□□ -1.73
SSR1P43307 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.26□□□□□ -1.73
SSR1P43307 AL592293.2-201ENST00000422292 996 ntBASIC4.26□□□□□ -1.73
SSR1P43307 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.26□□□□□ -1.73
SSR1P43307 TPTE2P3-201ENST00000441562 1189 ntBASIC4.26□□□□□ -1.73
SSR1P43307 TXNP1-201ENST00000441872 371 ntBASIC4.26□□□□□ -1.73
SSR1P43307 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.26□□□□□ -1.73
SSR1P43307 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.26□□□□□ -1.73
SSR1P43307 SBDSP1-204ENST00000453858 737 ntBASIC4.26□□□□□ -1.73
SSR1P43307 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms