Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 AC018754.1-201ENST00000607486 925 ntBASIC4.7□□□□□ -1.66
HOXD13P35453 AL356118.1-201ENST00000635272 1078 ntBASIC4.7□□□□□ -1.66
HOXD13P35453 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HOXD13P35453 AL133243.3-201ENST00000617415 3004 ntBASIC4.7□□□□□ -1.66
HOXD13P35453 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HOXD13P35453 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.7□□□□□ -1.66
HOXD13P35453 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HOXD13P35453 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 AC092435.4-201ENST00000623012 4159 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXD13P35453 RNA5SP509-201ENST00000364577 119 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD13P35453 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 RNU6-925P-201ENST00000384629 104 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 RNA5SP36-201ENST00000410197 133 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD13P35453 AC234779.1-201ENST00000425910 285 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD13P35453 PRELID3BP10-201ENST00000431957 584 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD13P35453 AL512326.1-201ENST00000443050 721 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD13P35453 RPS26P56-201ENST00000444468 240 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD13P35453 RPL23AP81-201ENST00000455252 467 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD13P35453 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 RNA5SP73-201ENST00000516744 108 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 RNU6-1028P-201ENST00000517164 93 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 AC019227.1-201ENST00000526902 510 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXD13P35453 AC118942.1-201ENST00000529674 1035 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC4.69□□□□□ -1.66
HOXD13P35453 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD13P35453 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD13P35453 MIR4277-201ENST00000578298 84 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.69□□□□□ -1.66
HOXD13P35453 AC064801.1-201ENST00000612025 407 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 AC105227.2-201ENST00000615075 605 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 AC009269.6-201ENST00000621778 588 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 MIR7641-1-201ENST00000627518 61 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 FAM157B-203ENST00000639350 358 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
HOXD13P35453 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.69□□□□□ -1.66
HOXD13P35453 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.69□□□□□ -1.66
HOXD13P35453 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 AC091046.3-201ENST00000631455 1574 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 DCAF13P3-201ENST00000561147 1334 ntBASIC4.69□□□□□ -1.66
HOXD13P35453 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HOXD13P35453 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD13P35453 MTND4P8-201ENST00000514997 1362 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 AC111188.2-201ENST00000529697 1387 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD13P35453 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD13P35453 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXD13P35453 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXD13P35453 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD13P35453 RNU1-14P-201ENST00000362759 152 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 OR1L1-202ENST00000373686 1083 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 RNU6-1293P-201ENST00000384077 107 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HOXD13P35453 DSTNP4-201ENST00000399472 474 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXD13P35453 AC016769.2-201ENST00000414815 475 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.68□□□□□ -1.66
HOXD13P35453 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 TCEA1P2-201ENST00000420496 906 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 GTF2IP2-201ENST00000424290 697 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 DNAJC19P7-201ENST00000428811 344 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HOXD13P35453 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 RPS23P1-201ENST00000491662 432 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 SNX5P1-201ENST00000505757 1041 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 AC008958.1-201ENST00000511047 682 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 RNU6-202P-201ENST00000515998 96 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 RNA5SP519-201ENST00000516480 119 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 snoZ278.1-201ENST00000517059 112 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 C1GALT1P3-201ENST00000522049 819 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 NDUFS5P6-201ENST00000529136 295 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.68□□□□□ -1.66
HOXD13P35453 LRRC6P1-201ENST00000532188 885 ntBASIC4.68□□□□□ -1.66
HOXD13P35453 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.68□□□□□ -1.66
HOXD13P35453 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC4.68□□□□□ -1.66
HOXD13P35453 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.68□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms