Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 ZNF603P-201ENST00000405613 487 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 HNRNPDP2-201ENST00000406475 478 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 RN7SKP182-201ENST00000410772 298 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 COX6CP15-201ENST00000426313 211 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 ATP5HP2-201ENST00000433885 485 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA3P32297 YWHAQP9-201ENST00000445891 512 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 RPS7P7-201ENST00000463499 571 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 NPM1P17-201ENST00000479221 602 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC069499.1-201ENST00000489433 509 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 RPS27AP13-201ENST00000498403 237 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 MTATP6P22-201ENST00000507369 598 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 AC099522.1-202ENST00000514718 367 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AP001033.2-201ENST00000609701 1003 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 RMST_9.1-201ENST00000619945 193 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC090506.2-201ENST00000624521 419 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 AL356094.1-201ENST00000624663 1212 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC091948.2-201ENST00000636510 279 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 AC083865.1-201ENST00000636634 831 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 MIR492-201ENST00000638676 116 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA3P32297 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.3□□□□□ -1.72
CHRNA3P32297 AC024341.1-201ENST00000526444 1552 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 AL136964.1-201ENST00000622038 2990 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.3□□□□□ -1.72
CHRNA3P32297 LINC02471-203ENST00000641941 4752 ntBASIC4.3□□□□□ -1.72
CHRNA3P32297 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CHRNA3P32297 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.3□□□□□ -1.72
CHRNA3P32297 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CHRNA3P32297 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA3P32297 MTND4P21-201ENST00000453886 1357 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CHRNA3P32297 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA3P32297 RNA5SP513-201ENST00000364648 118 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA3P32297 AL022722.2-201ENST00000402519 180 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA3P32297 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AL391219.1-201ENST00000422570 483 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AC087650.1-201ENST00000431445 468 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 RPS27P5-201ENST00000444247 244 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA3P32297 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA3P32297 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AL121877.1-201ENST00000453704 622 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC096992.1-201ENST00000459808 709 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA3P32297 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.29□□□□□ -1.72
CHRNA3P32297 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA3P32297 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA3P32297 AC006116.5-201ENST00000591936 559 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 OR4H6P-202ENST00000603819 340 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AC069304.3-201ENST00000603938 1084 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AL392112.1-201ENST00000605115 829 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AC010680.4-201ENST00000605334 543 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AL591034.3-201ENST00000605511 685 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 HMGB1P50-201ENST00000605814 607 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AP000255.1-201ENST00000610276 676 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 ZYXP1-201ENST00000617638 118 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA3P32297 AL359715.5-201ENST00000623431 443 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 AC009452.1-201ENST00000640823 606 ntBASIC4.29□□□□□ -1.72
CHRNA3P32297 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA3P32297 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CHRNA3P32297 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.29□□□□□ -1.72
CHRNA3P32297 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.29□□□□□ -1.72
CHRNA3P32297 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
CHRNA3P32297 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CHRNA3P32297 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms