Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PCNPP1-201ENST00000552501 511 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC006362.1-201ENST00000567392 174 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 MIR3611-201ENST00000584484 83 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 AC008507.1-201ENST00000587506 734 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 AL137072.1-201ENST00000603444 466 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC005084.1-201ENST00000605160 304 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 AC128687.1-201ENST00000605304 619 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC6A4P31645 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC6A4P31645 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC6A4P31645 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.11□□□□□ -1.59
SLC6A4P31645 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC6A4P31645 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.11□□□□□ -1.59
SLC6A4P31645 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC6A4P31645 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 AC092376.2-201ENST00000622621 4116 ntBASIC5.11□□□□□ -1.59
SLC6A4P31645 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC6A4P31645 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC6A4P31645 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC6A4P31645 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC6A4P31645 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC6A4P31645 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC6A4P31645 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
SLC6A4P31645 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC6A4P31645 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC6A4P31645 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC6A4P31645 RNU4-21P-201ENST00000362802 126 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 RNU4-75P-201ENST00000364621 146 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 SNORA56-201ENST00000383966 129 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 SNORD116-23-201ENST00000384645 92 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 RNU6-1151P-201ENST00000384684 107 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC6A4P31645 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SLC6A4P31645 AC013442.1-201ENST00000397347 228 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC6A4P31645 RPL21P67-201ENST00000402896 478 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 PIGPP2-201ENST00000411569 458 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 TPMTP3-201ENST00000411928 735 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC6A4P31645 MTCO2P34-201ENST00000421994 607 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC097063.1-201ENST00000426714 1797 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 C8orf59P1-201ENST00000429930 303 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC6A4P31645 AC099654.2-201ENST00000433031 1980 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC6A4P31645 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC6A4P31645 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC6A4P31645 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC6A4P31645 RPL37P3-201ENST00000456825 293 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 RPL23AP56-201ENST00000460778 453 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC092324.1-201ENST00000468671 324 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 RPL21P6-201ENST00000479171 504 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 RPL7P38-201ENST00000488396 739 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC007686.1-201ENST00000488511 463 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC6A4P31645 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC6A4P31645 GAPDHP56-201ENST00000506031 988 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC6A4P31645 OR7H2P-201ENST00000513483 306 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC6A4P31645 OR7K1P-201ENST00000546439 926 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC6A4P31645 AC027807.1-201ENST00000559921 996 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC093519.1-201ENST00000566109 298 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC6A4P31645 ROCK1P1-201ENST00000573767 549 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC6A4P31645 AC079089.3-201ENST00000603094 673 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 U73023.1-201ENST00000603134 700 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC020910.3-201ENST00000603701 874 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AP001521.2-201ENST00000608772 546 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC012360.2-201ENST00000609349 391 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AC015540.1-201ENST00000615828 501 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC6A4P31645 AL049536.1-201ENST00000625043 744 ntBASIC5.1□□□□□ -1.59
SLC6A4P31645 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC6A4P31645 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC6A4P31645 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC026951.1-201ENST00000559530 2459 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SLC6A4P31645 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC006484.1-201ENST00000435086 1884 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC6A4P31645 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SLC6A4P31645 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 AC010266.2-201ENST00000564741 3255 ntBASIC5.09□□□□□ -1.59
SLC6A4P31645 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC6A4P31645 SAMMSON-226ENST00000642089 1582 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms