Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC3P19447 NPM1P42-201ENST00000560329 862 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC3P19447 AC124068.1-201ENST00000563131 678 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.5□□□□□ -1.37
ERCC3P19447 AC080013.4-201ENST00000607624 649 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AC108479.2-201ENST00000617314 601 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AL603839.4-201ENST00000624658 1005 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC6.5□□□□□ -1.37
ERCC3P19447 AC005224.3-201ENST00000584683 2140 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.5□□□□□ -1.37
ERCC3P19447 AC239868.2-201ENST00000564237 4527 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
ERCC3P19447 AC093536.2-201ENST00000565257 1406 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.5□□□□□ -1.37
ERCC3P19447 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.5□□□□□ -1.37
ERCC3P19447 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
ERCC3P19447 RNA5SP183-201ENST00000362452 119 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 RNU1-77P-201ENST00000390868 162 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 AC005042.1-201ENST00000393397 800 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 DNAJA1P4-201ENST00000406473 1166 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 MIR1305-201ENST00000408300 86 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 SLC35E1P1-201ENST00000419313 864 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AL035410.1-201ENST00000427409 427 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC6.49□□□□□ -1.37
ERCC3P19447 AC006335.2-201ENST00000437993 330 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AC005297.2-201ENST00000450430 606 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 Z82190.1-201ENST00000454534 490 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 MTCO1P42-201ENST00000457379 726 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AC087312.1-201ENST00000471411 480 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 RN7SL826P-201ENST00000479724 288 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 LARP1BP2-201ENST00000486594 519 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 AC093767.1-201ENST00000504523 156 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 PGAM1P13-201ENST00000507497 754 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.49□□□□□ -1.37
ERCC3P19447 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC6.49□□□□□ -1.37
ERCC3P19447 MAL2-203ENST00000534619 578 ntTSL 4 BASIC6.49□□□□□ -1.37
ERCC3P19447 AC090424.1-201ENST00000535243 736 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.49□□□□□ -1.37
ERCC3P19447 MIR4801-201ENST00000582704 82 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AC103792.1-201ENST00000603591 919 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AC112191.3-201ENST00000604371 277 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 AC131902.3-201ENST00000611767 581 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 CYP3A51P-201ENST00000633513 256 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 AC006210.2-201ENST00000367074 1545 ntBASIC6.49□□□□□ -1.37
ERCC3P19447 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
ERCC3P19447 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
ERCC3P19447 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
ERCC3P19447 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ERCC3P19447 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ERCC3P19447 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
ERCC3P19447 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 AC114546.3-201ENST00000623582 1734 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.48□□□□□ -1.37
ERCC3P19447 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ERCC3P19447 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
ERCC3P19447 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ERCC3P19447 RNU6-297P-201ENST00000384636 107 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 MIR130A-201ENST00000385274 89 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
ERCC3P19447 SNORA68.2-201ENST00000391263 128 ntBASIC6.48□□□□□ -1.37
ERCC3P19447 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms