Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.53□□□□□ -1.68
TOP1P11387 SCARNA14-201ENST00000516903 136 ntBASIC4.53□□□□□ -1.68
TOP1P11387 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.53□□□□□ -1.68
TOP1P11387 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TOP1P11387 MED28P5-201ENST00000528254 438 ntBASIC4.53□□□□□ -1.68
TOP1P11387 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.53□□□□□ -1.68
TOP1P11387 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.53□□□□□ -1.68
TOP1P11387 AC025946.2-201ENST00000603398 234 ntBASIC4.53□□□□□ -1.68
TOP1P11387 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.53□□□□□ -1.68
TOP1P11387 AC116563.2-201ENST00000624751 535 ntBASIC4.53□□□□□ -1.68
TOP1P11387 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
TOP1P11387 AC100871.1-201ENST00000507871 1456 ntBASIC4.53□□□□□ -1.68
TOP1P11387 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.53□□□□□ -1.68
TOP1P11387 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.53□□□□□ -1.68
TOP1P11387 AC093311.1-201ENST00000506586 2021 ntBASIC4.53□□□□□ -1.68
TOP1P11387 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TOP1P11387 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TOP1P11387 AC007529.1-201ENST00000418574 2178 ntBASIC4.53□□□□□ -1.68
TOP1P11387 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
TOP1P11387 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 OR4A15-201ENST00000314706 1035 ntBASIC4.52□□□□□ -1.69
TOP1P11387 RNA5SP322-201ENST00000363617 119 ntBASIC4.52□□□□□ -1.69
TOP1P11387 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 AL603766.1-201ENST00000407763 664 ntBASIC4.52□□□□□ -1.69
TOP1P11387 RN7SKP156-201ENST00000410308 342 ntBASIC4.52□□□□□ -1.69
TOP1P11387 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 USP12PY-201ENST00000427677 1064 ntBASIC4.52□□□□□ -1.69
TOP1P11387 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.52□□□□□ -1.69
TOP1P11387 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 AC007563.3-201ENST00000433233 371 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AC007389.2-201ENST00000434630 306 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AC096638.2-201ENST00000434965 711 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 RPS17P13-201ENST00000448974 407 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 AC093853.1-201ENST00000515689 483 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 AC087499.8-201ENST00000578406 226 ntBASIC4.52□□□□□ -1.69
TOP1P11387 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.52□□□□□ -1.69
TOP1P11387 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 AP004372.1-201ENST00000604842 844 ntBASIC4.52□□□□□ -1.69
TOP1P11387 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 MIR486-1-201ENST00000612171 68 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AC078899.5-201ENST00000612475 178 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AC011472.4-201ENST00000615848 491 ntBASIC4.52□□□□□ -1.69
TOP1P11387 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 AL356863.1-201ENST00000623378 1080 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AC034229.5-201ENST00000624258 185 ntBASIC4.52□□□□□ -1.69
TOP1P11387 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.52□□□□□ -1.69
TOP1P11387 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.52□□□□□ -1.69
TOP1P11387 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TOP1P11387 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TOP1P11387 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TOP1P11387 RNF6P1-201ENST00000444889 1784 ntBASIC4.51□□□□□ -1.69
TOP1P11387 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TOP1P11387 RNU6-891P-201ENST00000384280 111 ntBASIC4.51□□□□□ -1.69
TOP1P11387 MIR554-201ENST00000384874 96 ntBASIC4.51□□□□□ -1.69
TOP1P11387 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TOP1P11387 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.51□□□□□ -1.69
TOP1P11387 MTND4P11-201ENST00000417020 1058 ntBASIC4.51□□□□□ -1.69
TOP1P11387 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TOP1P11387 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.51□□□□□ -1.69
TOP1P11387 AL445584.1-201ENST00000431451 330 ntBASIC4.51□□□□□ -1.69
TOP1P11387 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.51□□□□□ -1.69
TOP1P11387 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.51□□□□□ -1.69
TOP1P11387 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.51□□□□□ -1.69
TOP1P11387 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.51□□□□□ -1.69
TOP1P11387 MTCO3P42-201ENST00000509488 518 ntBASIC4.51□□□□□ -1.69
TOP1P11387 AC010342.1-201ENST00000514047 877 ntBASIC4.51□□□□□ -1.69
TOP1P11387 MTCO3P39-201ENST00000514812 518 ntBASIC4.51□□□□□ -1.69
TOP1P11387 RNU1-45P-201ENST00000517191 141 ntBASIC4.51□□□□□ -1.69
TOP1P11387 AC023632.4-201ENST00000517783 191 ntBASIC4.51□□□□□ -1.69
TOP1P11387 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.51□□□□□ -1.69
TOP1P11387 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.51□□□□□ -1.69
TOP1P11387 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
TOP1P11387 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TOP1P11387 AC135001.1-201ENST00000544546 283 ntBASIC4.51□□□□□ -1.69
TOP1P11387 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.51□□□□□ -1.69
TOP1P11387 MRPS35P3-201ENST00000603189 709 ntBASIC4.51□□□□□ -1.69
TOP1P11387 AC115621.1-201ENST00000604653 858 ntBASIC4.51□□□□□ -1.69
TOP1P11387 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.51□□□□□ -1.69
TOP1P11387 AC005344.1-201ENST00000613391 459 ntBASIC4.51□□□□□ -1.69
TOP1P11387 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.51□□□□□ -1.69
TOP1P11387 AL031985.3-201ENST00000565390 2449 ntBASIC4.51□□□□□ -1.69
TOP1P11387 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.51□□□□□ -1.69
TOP1P11387 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
TOP1P11387 AC027287.1-201ENST00000553115 1453 ntBASIC4.5□□□□□ -1.69
TOP1P11387 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.5□□□□□ -1.69
TOP1P11387 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TOP1P11387 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
TOP1P11387 RNA5SP239-201ENST00000410218 129 ntBASIC4.5□□□□□ -1.69
TOP1P11387 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms