Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL2A1P02458 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL2A1P02458 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL2A1P02458 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.43□□□□□ -1.7
COL2A1P02458 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.43□□□□□ -1.7
COL2A1P02458 AC099063.2-201ENST00000446360 662 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AL139824.2-201ENST00000458731 1095 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 UBE2DNL-203ENST00000474922 222 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL2A1P02458 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.43□□□□□ -1.7
COL2A1P02458 CDH12P2-201ENST00000504393 298 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 HSPD1P15-201ENST00000505573 1122 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.43□□□□□ -1.7
COL2A1P02458 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC4.43□□□□□ -1.7
COL2A1P02458 AP003102.1-201ENST00000525638 661 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.43□□□□□ -1.7
COL2A1P02458 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.43□□□□□ -1.7
COL2A1P02458 MTND1P24-201ENST00000552175 861 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 MIR3922-201ENST00000585192 84 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AL390816.3-201ENST00000604527 1066 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC087683.2-201ENST00000611384 326 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC084824.5-201ENST00000612009 413 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 MIR6852-201ENST00000621699 66 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 CR392039.4-201ENST00000624968 501 ntBASIC4.43□□□□□ -1.7
COL2A1P02458 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.43□□□□□ -1.7
COL2A1P02458 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
COL2A1P02458 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL2A1P02458 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL2A1P02458 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL2A1P02458 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL2A1P02458 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL2A1P02458 MTND4P13-201ENST00000402078 1023 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.42□□□□□ -1.7
COL2A1P02458 AL158156.1-201ENST00000422509 473 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.42□□□□□ -1.7
COL2A1P02458 ZFAND6P1-201ENST00000434138 605 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.42□□□□□ -1.7
COL2A1P02458 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC4.42□□□□□ -1.7
COL2A1P02458 SNORA71B-202ENST00000439232 272 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 ELOCP8-201ENST00000439309 332 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AC092641.1-201ENST00000440229 772 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 ELOCP15-201ENST00000442090 332 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 RPL21P23-201ENST00000446654 460 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 ZNF736P6Y-201ENST00000447526 1213 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 RPL5P24-201ENST00000463742 885 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AC022795.1-201ENST00000473808 480 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.42□□□□□ -1.7
COL2A1P02458 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.42□□□□□ -1.7
COL2A1P02458 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.42□□□□□ -1.7
COL2A1P02458 AC008628.1-201ENST00000508663 265 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 SCARNA1-201ENST00000517138 166 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.42□□□□□ -1.7
COL2A1P02458 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.42□□□□□ -1.7
COL2A1P02458 AP003049.1-201ENST00000529418 457 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.42□□□□□ -1.7
COL2A1P02458 AL109741.3-201ENST00000561748 592 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.42□□□□□ -1.7
COL2A1P02458 AL158050.2-201ENST00000605336 568 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AC138473.1-201ENST00000605717 526 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.42□□□□□ -1.7
COL2A1P02458 AL049777.1-201ENST00000622740 518 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.42□□□□□ -1.7
COL2A1P02458 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.42□□□□□ -1.7
COL2A1P02458 AL355578.1-201ENST00000607405 1328 ntBASIC4.42□□□□□ -1.7
COL2A1P02458 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL2A1P02458 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL2A1P02458 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.42□□□□□ -1.7
COL2A1P02458 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL2A1P02458 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
COL2A1P02458 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 RNA5SP424-201ENST00000390988 115 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AL078595.1-201ENST00000404458 226 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AC096644.3-201ENST00000416788 338 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.41□□□□□ -1.7
COL2A1P02458 AC006480.1-201ENST00000449887 378 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 RPL5P16-201ENST00000471467 790 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.41□□□□□ -1.7
COL2A1P02458 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.41□□□□□ -1.7
COL2A1P02458 HSPA8P19-201ENST00000505359 1517 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.41□□□□□ -1.7
COL2A1P02458 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 RN7SKP57-201ENST00000517248 293 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.41□□□□□ -1.7
COL2A1P02458 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.41□□□□□ -1.7
COL2A1P02458 OR8I1P-201ENST00000529291 931 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AP005205.1-201ENST00000563503 508 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AP005262.1-201ENST00000582646 997 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AC013244.3-201ENST00000605614 388 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 AC022079.1-201ENST00000621546 602 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AC243312.2-201ENST00000623340 601 ntBASIC4.41□□□□□ -1.7
COL2A1P02458 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.41□□□□□ -1.7
COL2A1P02458 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.41□□□□□ -1.7
COL2A1P02458 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
COL2A1P02458 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms