Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.29□□□□□ -1.72
COL1A1P02452 OR6C71P-202ENST00000641886 1107 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
COL1A1P02452 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.29□□□□□ -1.72
COL1A1P02452 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL1A1P02452 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL1A1P02452 MFSD8-233ENST00000641482 4860 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 LINC02471-203ENST00000641941 4752 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
COL1A1P02452 AC093849.1-201ENST00000563631 2209 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL1A1P02452 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL1A1P02452 FRG1CP-201ENST00000358464 769 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 RNU1-18P-201ENST00000363062 164 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 RNA5SP322-201ENST00000363617 119 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL1A1P02452 AC004552.1-201ENST00000419089 348 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AL035458.1-201ENST00000433096 585 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.28□□□□□ -1.72
COL1A1P02452 RPS26P3-201ENST00000470205 348 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AC090543.2-201ENST00000483963 348 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AC004057.1-201ENST00000485827 348 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AC093663.1-201ENST00000497190 394 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AC004069.2-201ENST00000505438 1114 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC4.28□□□□□ -1.72
COL1A1P02452 RN7SKP289-201ENST00000517244 295 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AC090136.1-201ENST00000520009 240 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 HIGD1AP18-201ENST00000520730 278 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AC092747.2-201ENST00000545069 983 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AC011611.1-201ENST00000552179 197 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.28□□□□□ -1.72
COL1A1P02452 MIR4325-201ENST00000583049 90 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.28□□□□□ -1.72
COL1A1P02452 EIF1P6-201ENST00000600054 334 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 BRDTP1-201ENST00000605735 677 ntBASIC4.28□□□□□ -1.72
COL1A1P02452 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.28□□□□□ -1.72
COL1A1P02452 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
COL1A1P02452 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
COL1A1P02452 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
COL1A1P02452 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.73
COL1A1P02452 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.27□□□□□ -1.73
COL1A1P02452 MTND4P26-201ENST00000415971 1359 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.27□□□□□ -1.73
COL1A1P02452 RNA5SP197-201ENST00000363357 119 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 SNORA38.1-201ENST00000364172 131 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 MIR128-1-201ENST00000384921 82 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.27□□□□□ -1.73
COL1A1P02452 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
COL1A1P02452 MTND6P5-201ENST00000448266 512 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.27□□□□□ -1.73
COL1A1P02452 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.27□□□□□ -1.73
COL1A1P02452 AC010285.3-201ENST00000511668 676 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 LEF1-218ENST00000512172 598 ntTSL 2 BASIC4.27□□□□□ -1.73
COL1A1P02452 AC010342.1-201ENST00000514047 877 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.27□□□□□ -1.73
COL1A1P02452 RNU6-579P-201ENST00000516879 102 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC4.27□□□□□ -1.73
COL1A1P02452 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC4.27□□□□□ -1.73
COL1A1P02452 SCARNA15.3-201ENST00000626315 122 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 SCARNA4.1-201ENST00000628597 123 ntBASIC4.27□□□□□ -1.73
COL1A1P02452 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.27□□□□□ -1.73
COL1A1P02452 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.27□□□□□ -1.73
COL1A1P02452 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
COL1A1P02452 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL1A1P02452 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.27□□□□□ -1.73
COL1A1P02452 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
COL1A1P02452 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL1A1P02452 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL1A1P02452 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 CDY11P-201ENST00000447168 1651 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL1A1P02452 AC073073.2-201ENST00000609827 2578 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL1A1P02452 HMGN2P8-201ENST00000391458 268 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.26□□□□□ -1.73
COL1A1P02452 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
COL1A1P02452 RPF2P1-201ENST00000424137 906 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.26□□□□□ -1.73
COL1A1P02452 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.26□□□□□ -1.73
COL1A1P02452 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.26□□□□□ -1.73
COL1A1P02452 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.26□□□□□ -1.73
COL1A1P02452 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.26□□□□□ -1.73
COL1A1P02452 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.26□□□□□ -1.73
COL1A1P02452 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.26□□□□□ -1.73
COL1A1P02452 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.26□□□□□ -1.73
COL1A1P02452 AC068790.5-201ENST00000602741 355 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 MIR6852-201ENST00000621699 66 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 AP003355.3-201ENST00000623465 114 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.26□□□□□ -1.73
COL1A1P02452 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL1A1P02452 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL1A1P02452 MTCO1P46-201ENST00000451639 1491 ntBASIC4.26□□□□□ -1.73
COL1A1P02452 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
COL1A1P02452 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
COL1A1P02452 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.26□□□□□ -1.73
COL1A1P02452 AC020633.1-201ENST00000468439 2247 ntBASIC4.25□□□□□ -1.73
COL1A1P02452 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms