Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.51□□□□□ -1.85
SGCEO43556 MIR6830-201ENST00000636015 70 ntBASIC3.51□□□□□ -1.85
SGCEO43556 OR52H1-202ENST00000641796 1061 ntBASIC3.51□□□□□ -1.85
SGCEO43556 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SGCEO43556 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SGCEO43556 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.51□□□□□ -1.85
SGCEO43556 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.5□□□□□ -1.85
SGCEO43556 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
SGCEO43556 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.5□□□□□ -1.85
SGCEO43556 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 RPL32P3-201ENST00000359025 275 ntBASIC3.5□□□□□ -1.85
SGCEO43556 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.5□□□□□ -1.85
SGCEO43556 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 RNU6-185P-201ENST00000384421 107 ntBASIC3.5□□□□□ -1.85
SGCEO43556 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 MTCO3P31-201ENST00000405526 789 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.5□□□□□ -1.85
SGCEO43556 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.5□□□□□ -1.85
SGCEO43556 RPL7AP73-201ENST00000413490 353 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 AL049610.1-201ENST00000423374 372 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 AL121578.1-201ENST00000428051 892 ntBASIC3.5□□□□□ -1.85
SGCEO43556 HIGD1AP4-201ENST00000430194 280 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC3.5□□□□□ -1.85
SGCEO43556 AC096638.2-201ENST00000434965 711 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 RPL9P32-201ENST00000464118 620 ntBASIC3.5□□□□□ -1.85
SGCEO43556 RPL23AP14-201ENST00000468281 468 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AP000893.1-201ENST00000474462 794 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.5□□□□□ -1.85
SGCEO43556 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.5□□□□□ -1.85
SGCEO43556 AC026979.1-201ENST00000492525 396 ntBASIC3.5□□□□□ -1.85
SGCEO43556 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.5□□□□□ -1.85
SGCEO43556 ATG10-AS1-201ENST00000504846 648 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.5□□□□□ -1.85
SGCEO43556 AC010342.1-201ENST00000514047 877 ntBASIC3.5□□□□□ -1.85
SGCEO43556 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
SGCEO43556 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 AC091516.1-201ENST00000549191 703 ntBASIC3.5□□□□□ -1.85
SGCEO43556 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.5□□□□□ -1.85
SGCEO43556 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.5□□□□□ -1.85
SGCEO43556 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC3.5□□□□□ -1.85
SGCEO43556 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.5□□□□□ -1.85
SGCEO43556 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.5□□□□□ -1.85
SGCEO43556 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.5□□□□□ -1.85
SGCEO43556 MIR548Y-201ENST00000582739 110 ntBASIC3.5□□□□□ -1.85
SGCEO43556 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 LLPHP1-201ENST00000603571 367 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AL137246.1-201ENST00000607072 977 ntBASIC3.5□□□□□ -1.85
SGCEO43556 RNU4-89P-201ENST00000607443 133 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AC092653.1-201ENST00000608509 531 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AC135803.1-201ENST00000608748 565 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.5□□□□□ -1.85
SGCEO43556 AC105429.2-201ENST00000610567 517 ntBASIC3.5□□□□□ -1.85
SGCEO43556 MIR6868-201ENST00000611215 58 ntBASIC3.5□□□□□ -1.85
SGCEO43556 AL139089.1-201ENST00000620372 975 ntBASIC3.5□□□□□ -1.85
SGCEO43556 MIR6758-201ENST00000620653 63 ntBASIC3.5□□□□□ -1.85
SGCEO43556 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.5□□□□□ -1.85
SGCEO43556 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SGCEO43556 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 MFSD8-236ENST00000641509 4050 ntBASIC3.5□□□□□ -1.85
SGCEO43556 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SGCEO43556 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.5□□□□□ -1.85
SGCEO43556 NCAPGP1-201ENST00000505112 1814 ntBASIC3.49□□□□□ -1.85
SGCEO43556 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 AC006042.3-201ENST00000454684 1469 ntBASIC3.49□□□□□ -1.85
SGCEO43556 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.49□□□□□ -1.85
SGCEO43556 CASC19-261ENST00000641853 1638 ntBASIC3.49□□□□□ -1.85
SGCEO43556 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SGCEO43556 AC126755.2-208ENST00000327792 462 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AC138969.1-213ENST00000331436 462 ntBASIC3.49□□□□□ -1.85
SGCEO43556 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.49□□□□□ -1.85
SGCEO43556 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SGCEO43556 RNA5SP130-201ENST00000364431 114 ntBASIC3.49□□□□□ -1.85
SGCEO43556 RNA5SP167-201ENST00000365461 116 ntBASIC3.49□□□□□ -1.85
SGCEO43556 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.49□□□□□ -1.85
SGCEO43556 RNU6-891P-201ENST00000384280 111 ntBASIC3.49□□□□□ -1.85
SGCEO43556 RNU6-31P-201ENST00000384388 108 ntBASIC3.49□□□□□ -1.85
SGCEO43556 SNORA70C-201ENST00000384538 135 ntBASIC3.49□□□□□ -1.85
SGCEO43556 MIR141-201ENST00000384975 95 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AL022722.2-201ENST00000402519 180 ntBASIC3.49□□□□□ -1.85
SGCEO43556 AC069218.2-201ENST00000411665 344 ntBASIC3.49□□□□□ -1.85
SGCEO43556 CASKP1-201ENST00000412870 582 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms