Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.89□□□□□ -1.79
LSM1O15116 TATDN1-221ENST00000630259 915 ntTSL 5 BASIC3.89□□□□□ -1.79
LSM1O15116 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
LSM1O15116 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.89□□□□□ -1.79
LSM1O15116 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LSM1O15116 Z82217.1-201ENST00000625157 8149 ntBASIC3.89□□□□□ -1.79
LSM1O15116 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LSM1O15116 AC025125.1-201ENST00000624743 1922 ntBASIC3.88□□□□□ -1.79
LSM1O15116 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LSM1O15116 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LSM1O15116 RNU4-39P-201ENST00000362455 127 ntBASIC3.88□□□□□ -1.79
LSM1O15116 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 MTHFD2P2-201ENST00000407725 247 ntBASIC3.88□□□□□ -1.79
LSM1O15116 RNU2-6P-201ENST00000411404 190 ntBASIC3.88□□□□□ -1.79
LSM1O15116 RPL30P2-201ENST00000414021 291 ntBASIC3.88□□□□□ -1.79
LSM1O15116 ELOCP6-201ENST00000429066 328 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 ATP5HP2-201ENST00000433885 485 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AC096638.2-201ENST00000434965 711 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.88□□□□□ -1.79
LSM1O15116 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.88□□□□□ -1.79
LSM1O15116 TXNP1-201ENST00000441872 371 ntBASIC3.88□□□□□ -1.79
LSM1O15116 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.88□□□□□ -1.79
LSM1O15116 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.88□□□□□ -1.79
LSM1O15116 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.88□□□□□ -1.79
LSM1O15116 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 ELOCP12-201ENST00000458706 328 ntBASIC3.88□□□□□ -1.79
LSM1O15116 RN7SL303P-201ENST00000469773 251 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.88□□□□□ -1.79
LSM1O15116 AC069499.1-201ENST00000489433 509 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AL035404.1-201ENST00000497982 568 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 AC108475.1-201ENST00000507880 950 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.88□□□□□ -1.79
LSM1O15116 AC108157.1-201ENST00000510511 539 ntBASIC3.88□□□□□ -1.79
LSM1O15116 RN7SKP82-201ENST00000516786 223 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LSM1O15116 HIGD1AP10-201ENST00000527837 282 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.88□□□□□ -1.79
LSM1O15116 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.88□□□□□ -1.79
LSM1O15116 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 AC025627.2-201ENST00000576220 160 ntBASIC3.88□□□□□ -1.79
LSM1O15116 MIR4443-201ENST00000585052 53 ntBASIC3.88□□□□□ -1.79
LSM1O15116 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.88□□□□□ -1.79
LSM1O15116 MRPS35P3-201ENST00000603189 709 ntBASIC3.88□□□□□ -1.79
LSM1O15116 MIR8058-201ENST00000615737 89 ntBASIC3.88□□□□□ -1.79
LSM1O15116 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
LSM1O15116 SEPT7P7-201ENST00000420492 1301 ntBASIC3.88□□□□□ -1.79
LSM1O15116 DCAF13P1-201ENST00000495256 1330 ntBASIC3.88□□□□□ -1.79
LSM1O15116 ZNF826P-207ENST00000622273 1910 ntBASIC3.87□□□□□ -1.79
LSM1O15116 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LSM1O15116 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.87□□□□□ -1.79
LSM1O15116 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.87□□□□□ -1.79
LSM1O15116 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
LSM1O15116 AP001148.1-201ENST00000624124 2359 ntBASIC3.87□□□□□ -1.79
LSM1O15116 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
LSM1O15116 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LSM1O15116 SNORA60-201ENST00000362396 134 ntBASIC3.87□□□□□ -1.79
LSM1O15116 RNA5SP167-201ENST00000365461 116 ntBASIC3.87□□□□□ -1.79
LSM1O15116 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.87□□□□□ -1.79
LSM1O15116 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LSM1O15116 MIR1251-201ENST00000408552 70 ntBASIC3.87□□□□□ -1.79
LSM1O15116 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.87□□□□□ -1.79
LSM1O15116 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM1O15116 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM1O15116 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.87□□□□□ -1.79
LSM1O15116 TMED11P-201ENST00000479478 690 ntBASIC3.87□□□□□ -1.79
LSM1O15116 RPS23P1-201ENST00000491662 432 ntBASIC3.87□□□□□ -1.79
LSM1O15116 RN7SL604P-201ENST00000492589 296 ntBASIC3.87□□□□□ -1.79
LSM1O15116 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.87□□□□□ -1.79
LSM1O15116 AC005798.1-201ENST00000513715 387 ntBASIC3.87□□□□□ -1.79
LSM1O15116 IGKV2-36-201ENST00000519999 223 ntBASIC3.87□□□□□ -1.79
LSM1O15116 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM1O15116 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM1O15116 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM1O15116 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.87□□□□□ -1.79
LSM1O15116 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.87□□□□□ -1.79
LSM1O15116 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.87□□□□□ -1.79
LSM1O15116 AC104785.1-201ENST00000603220 588 ntBASIC3.87□□□□□ -1.79
LSM1O15116 AC069304.3-201ENST00000603938 1084 ntBASIC3.87□□□□□ -1.79
LSM1O15116 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.87□□□□□ -1.79
LSM1O15116 AC245389.2-201ENST00000616023 576 ntBASIC3.87□□□□□ -1.79
LSM1O15116 AC243756.2-201ENST00000618406 463 ntBASIC3.87□□□□□ -1.79
LSM1O15116 AL121890.3-201ENST00000618494 516 ntBASIC3.87□□□□□ -1.79
LSM1O15116 AC242843.1-201ENST00000618702 573 ntBASIC3.87□□□□□ -1.79
LSM1O15116 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC3.87□□□□□ -1.79
LSM1O15116 IPO8P1-201ENST00000455509 3109 ntBASIC3.87□□□□□ -1.79
LSM1O15116 MFSD8-236ENST00000641509 4050 ntBASIC3.87□□□□□ -1.79
LSM1O15116 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LSM1O15116 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LSM1O15116 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
LSM1O15116 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
LSM1O15116 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.86□□□□□ -1.79
LSM1O15116 UBE3AP2-201ENST00000429033 2259 ntBASIC3.86□□□□□ -1.79
LSM1O15116 AL133383.2-201ENST00000622958 2336 ntBASIC3.86□□□□□ -1.79
LSM1O15116 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
LSM1O15116 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 141.5 ms