Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.68□□□□□ -1.66
PKP3Q9Y446 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKP3Q9Y446 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKP3Q9Y446 AL109653.1-201ENST00000603091 248 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 PSMA6P4-201ENST00000603247 718 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 AC024940.4-201ENST00000605507 246 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 AC018638.7-201ENST00000605836 1114 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 AL355816.1-201ENST00000607951 118 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 AL451074.6-201ENST00000608512 729 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 VIS1.1-201ENST00000610517 203 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.68□□□□□ -1.66
PKP3Q9Y446 AL359757.1-201ENST00000623176 255 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.68□□□□□ -1.66
PKP3Q9Y446 MIR4278-201ENST00000636094 69 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PKP3Q9Y446 AL031119.1-201ENST00000404707 1879 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 AC107027.3-201ENST00000565095 3473 ntBASIC4.68□□□□□ -1.66
PKP3Q9Y446 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.68□□□□□ -1.66
PKP3Q9Y446 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKP3Q9Y446 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKP3Q9Y446 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKP3Q9Y446 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 MAPK10-303ENST00000641324 3959 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AL590240.1-201ENST00000334118 313 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 RNU1-83P-201ENST00000363426 164 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 PTP4A1P5-201ENST00000420305 455 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 ATP5F1P1-201ENST00000433775 569 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 MTND3P1-201ENST00000441336 220 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 COX6CP18-201ENST00000448769 222 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 RPL35AP28-201ENST00000459730 331 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 RPL5P24-201ENST00000463742 885 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 MTCYBP16-201ENST00000509187 1129 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 OR7H2P-201ENST00000513483 306 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 RNA5SP135-201ENST00000517019 125 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 MTCO1P47-201ENST00000523889 1271 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC005832.3-201ENST00000537929 631 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC004217.3-201ENST00000551552 878 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 MIR4270-201ENST00000581799 70 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AL031281.1-201ENST00000604049 488 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC091488.1-201ENST00000604239 660 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 Z94722.1-201ENST00000604328 474 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AL158042.1-201ENST00000605338 460 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC097505.1-201ENST00000610199 565 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AP003399.1-201ENST00000637534 361 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 OR2L1P-202ENST00000641567 1023 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 CASC19-204ENST00000641001 2055 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PKP3Q9Y446 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC134882.1-201ENST00000603738 1676 ntBASIC4.67□□□□□ -1.66
PKP3Q9Y446 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKP3Q9Y446 AC010329.2-201ENST00000595195 2737 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
PKP3Q9Y446 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.66□□□□□ -1.66
PKP3Q9Y446 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
PKP3Q9Y446 AC108467.2-201ENST00000617640 1597 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 AC027290.2-201ENST00000623210 18662 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.66□□□□□ -1.66
PKP3Q9Y446 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PKP3Q9Y446 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.66□□□□□ -1.66
PKP3Q9Y446 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.66□□□□□ -1.66
PKP3Q9Y446 MIR217-201ENST00000384817 110 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
PKP3Q9Y446 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.66□□□□□ -1.66
PKP3Q9Y446 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
PKP3Q9Y446 AL161909.1-201ENST00000397390 712 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 RNA5SP80-201ENST00000410475 111 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 ATG4AP1-201ENST00000416893 538 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 AC009518.2-201ENST00000418056 731 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 RPL7P44-201ENST00000424827 742 ntBASIC4.66□□□□□ -1.66
PKP3Q9Y446 Z93242.1-201ENST00000427102 353 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms