Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC083899.3-201ENST00000603413 594 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC007423.1-201ENST00000605009 627 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC007620.3-201ENST00000608131 497 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC005344.1-201ENST00000613391 459 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AC020978.9-201ENST00000624380 1141 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 AL139811.1-201ENST00000424779 2299 ntBASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS29Q9UBQ0 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AP004289.2-201ENST00000444413 1457 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 XIAPP3-201ENST00000312918 795 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AC007685.1-201ENST00000329806 452 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 RNU6-167P-201ENST00000384292 106 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 MIR30B-201ENST00000384850 88 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 SOD2P1-201ENST00000396543 562 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 MTCYBP7-201ENST00000419540 1134 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 RAB28P3-201ENST00000448325 597 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 RN7SL385P-201ENST00000468873 276 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AC010683.1-201ENST00000473673 378 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AC068305.1-201ENST00000497406 726 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 TOMM20P2-201ENST00000540082 421 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AL121576.1-201ENST00000556055 276 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AC244505.7-201ENST00000599675 272 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AL732372.2-225ENST00000642124 456 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AC017002.4-201ENST00000604721 1525 ntBASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS29Q9UBQ0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 RN7SKP222-201ENST00000410651 315 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC114814.2-201ENST00000419195 485 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 RPS20P21-201ENST00000466859 343 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC021205.1-201ENST00000468797 348 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 RN7SL132P-201ENST00000478131 296 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 VN1R105P-201ENST00000486595 910 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 FTH1P9-201ENST00000513251 355 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 HIGD1AP5-201ENST00000529959 259 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC008011.1-201ENST00000545989 227 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 TRAV15-201ENST00000556680 249 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AGGF1P8-201ENST00000562979 1000 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC027281.1-201ENST00000574178 758 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 MIR5187-201ENST00000583479 76 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC015911.5-201ENST00000587076 451 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC115621.1-201ENST00000604653 858 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC010857.1-201ENST00000606398 594 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC092653.1-201ENST00000608509 531 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC020763.5-201ENST00000623298 430 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 CDRT1-208ENST00000630868 794 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AP000553.6-201ENST00000641242 118 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AC106871.1-201ENST00000568324 3102 ntBASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
VPS29Q9UBQ0 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms