Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 SNORD56.6-201ENST00000384569 71 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AL450338.1-201ENST00000407987 512 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC073264.1-201ENST00000411508 416 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 B3GALNT1P1-201ENST00000420569 975 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 OR8F1P-201ENST00000425243 930 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 MTND1P2-201ENST00000430604 821 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 RPL7P36-201ENST00000444633 681 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 NDUFA5P7-201ENST00000452914 242 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 RPL37P3-201ENST00000456825 293 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 RPL7AP52-201ENST00000458096 790 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 RPL31P58-201ENST00000469001 379 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC105252.1-201ENST00000503089 286 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 PDLIM1P4-201ENST00000504327 1006 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 PRDX4P1-201ENST00000507189 574 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC108475.1-201ENST00000507880 950 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC008549.1-201ENST00000512900 643 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 SCARNA16.4-201ENST00000516956 187 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC118273.2-201ENST00000532092 465 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC068587.4-201ENST00000533893 186 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 MIR548S-201ENST00000581352 82 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 MIR548AB-201ENST00000584917 84 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC091135.1-201ENST00000585943 307 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC079395.2-201ENST00000610982 737 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 MIR6862-1-201ENST00000613016 70 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC025253.1-201ENST00000613623 543 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 MIR6862-2-201ENST00000614755 70 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 OR5AK4P-201ENST00000635912 903 ntBASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
PPARGC1AQ9UBK2 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC009313.2-201ENST00000417893 1941 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 OR4G11P-202ENST00000642116 1414 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 RNA5SP335-201ENST00000363817 110 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC009804.1-201ENST00000400949 179 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 DBIP1-201ENST00000401435 260 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 RPS24P12-201ENST00000402084 394 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 BTF3P7-201ENST00000407097 488 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 HMGB1P11-201ENST00000413899 637 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC122718.1-201ENST00000439448 744 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 CNOT7P2-201ENST00000441051 832 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AL035090.1-201ENST00000454835 332 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 FAM133DP-201ENST00000464802 691 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 KLF3P2-201ENST00000465138 268 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 LARP1BP2-201ENST00000486594 519 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AL358832.1-201ENST00000497800 389 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC021678.1-201ENST00000505195 936 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 RNU6-528P-201ENST00000516926 100 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 PAICSP4-201ENST00000517543 1253 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 IGKV2-18-201ENST00000522607 343 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AF279873.1-201ENST00000523393 313 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 OR4A45P-201ENST00000529954 901 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 OR6C73P-201ENST00000546432 358 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 RPS3AP4-201ENST00000555161 764 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 BGLT3-201ENST00000564523 994 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 MIR4660-201ENST00000583549 74 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AL159169.3-201ENST00000608871 561 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AC108479.2-201ENST00000617314 601 ntBASIC5.6□□□□□ -1.51
PPARGC1AQ9UBK2 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms