Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC5.21□□□□□ -1.58
COL20A1Q9P218 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL20A1Q9P218 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL20A1Q9P218 RNU1-130P-201ENST00000363930 160 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 RNU6-157P-201ENST00000383957 107 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 Z98745.1-201ENST00000402553 494 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL20A1Q9P218 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 MTND4P22-201ENST00000413116 1169 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 TMSB10P2-201ENST00000416049 131 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AL365338.1-201ENST00000422282 858 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AL139421.1-201ENST00000423010 169 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 Z93242.1-201ENST00000427102 353 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 ELOCP10-201ENST00000440624 327 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 ART2BP-201ENST00000453501 499 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 RFC5P1-201ENST00000454419 874 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC083829.1-201ENST00000503756 657 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 MRPS33P3-201ENST00000513456 322 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 IGLVIV-65-201ENST00000517313 360 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 MTCO1P47-201ENST00000523889 1271 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC005832.3-201ENST00000537929 631 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 DUXAP1-201ENST00000556632 463 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC015912.2-201ENST00000571053 181 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC123786.2-201ENST00000603459 275 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 ELOCP34-201ENST00000604436 327 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AL590392.1-201ENST00000604960 446 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AC005962.2-201ENST00000611427 652 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 AL450489.1-201ENST00000612071 468 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 OR2L1P-202ENST00000641567 1023 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL20A1Q9P218 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 DCAF13P3-201ENST00000561147 1334 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 USP9YP4-201ENST00000424401 1745 ntBASIC5.2□□□□□ -1.58
COL20A1Q9P218 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
COL20A1Q9P218 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
COL20A1Q9P218 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL20A1Q9P218 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC009229.4-201ENST00000623854 1947 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
COL20A1Q9P218 RNU6-1066P-201ENST00000363573 105 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 Y_RNA.169-201ENST00000363745 96 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
COL20A1Q9P218 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 RNU6-1151P-201ENST00000384684 107 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 MIR217-201ENST00000384817 110 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 RNU6-1300P-201ENST00000391046 108 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AL356387.2-201ENST00000422272 243 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 MTND4P20-201ENST00000424125 869 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC234779.1-201ENST00000425910 285 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 ATP5F1P1-201ENST00000433775 569 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC093155.1-201ENST00000440164 826 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC004865.1-201ENST00000442276 1003 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 F11-205ENST00000492972 1204 ntTSL 2 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 RN7SKP122-201ENST00000515923 296 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 RNU6-1129P-201ENST00000515964 104 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 Y_RNA.688-201ENST00000516565 95 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AP001207.1-201ENST00000524051 481 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 AP000827.1-201ENST00000527814 258 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 KPNA2P3-201ENST00000584190 848 ntBASIC5.19□□□□□ -1.58
COL20A1Q9P218 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.19□□□□□ -1.58
COL20A1Q9P218 VN1R82P-201ENST00000601481 356 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms