Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AP003117.2-201ENST00000606010 545 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AL353726.1-201ENST00000614041 1000 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 MIR6758-201ENST00000620653 63 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 CR381653.2-201ENST00000624041 768 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC015726.3-201ENST00000624501 418 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC135352.1-201ENST00000506173 1418 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 DDX18P4-201ENST00000511690 1966 ntBASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM7Q9NR12 SLC4A8-202ENST00000358657 11731 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 OR9K1P-202ENST00000641111 3217 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AP001284.1-201ENST00000528393 2118 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC011447.7-201ENST00000624228 1590 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 RNU6-501P-201ENST00000364072 100 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 Y_RNA.256-201ENST00000364594 104 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 RNU4-12P-201ENST00000365233 139 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 RNU5A-6P-201ENST00000384136 116 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 MIR600-201ENST00000385007 98 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 MIR181A1-201ENST00000385026 110 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 MIR16-1-201ENST00000385271 89 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL139098.1-201ENST00000407291 389 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 CHEK2P3-201ENST00000416118 248 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC009480.2-201ENST00000422916 432 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 EI24P4-201ENST00000423683 1078 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL009174.1-201ENST00000426577 416 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL365184.2-201ENST00000431139 435 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 RHOT1P3-201ENST00000436571 331 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 NOP56P2-201ENST00000447491 769 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL513533.1-201ENST00000453728 415 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 BTF3P13-201ENST00000513224 490 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 HMGN1P9-201ENST00000515212 298 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC008802.1-201ENST00000519121 791 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AP002812.4-201ENST00000532139 286 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC022884.3-201ENST00000579571 248 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 MIR4420-201ENST00000583944 77 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC112230.1-201ENST00000604342 547 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL627230.1-201ENST00000613077 211 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL591926.8-201ENST00000616876 211 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 AL591135.1-201ENST00000401578 5914 ntBASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
PDLIM7Q9NR12 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 MAPK10-338ENST00000641647 3362 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 RPL21P132-201ENST00000331267 462 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 Y_RNA.11-201ENST00000362375 109 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 RN7SKP145-201ENST00000363291 303 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 SNORA72.1-201ENST00000363485 129 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 HMGN1P14-201ENST00000412459 517 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 DDX39BP1-205ENST00000422507 192 ntBASIC5.85□□□□□ -1.47
PDLIM7Q9NR12 GLRXP1-201ENST00000423261 334 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 174.7 ms