Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 MTCO1P23-201ENST00000415223 1526 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 CR383658.2-201ENST00000547576 1525 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 AC135352.1-201ENST00000506173 1418 ntBASIC5.74□□□□□ -1.49
BCAS3Q9H6U6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 Z95114.1-201ENST00000624264 14574 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 Z99496.1-201ENST00000469424 1477 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC100871.1-201ENST00000507871 1456 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 Y_RNA.61-201ENST00000362835 102 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 Y_RNA.70-201ENST00000362886 110 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 RNU6-660P-201ENST00000364566 109 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 RNU6-619P-201ENST00000365146 108 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL590002.1-201ENST00000406554 418 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 RN7SKP16-201ENST00000410180 299 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 MTATP6P27-201ENST00000416987 621 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 GAPDHP49-201ENST00000421421 961 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 DDX39BP1-205ENST00000422507 192 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL009174.1-201ENST00000426577 416 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 HSPD1P12-201ENST00000429127 1069 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 UBE2V1P3-201ENST00000439651 417 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 RPL7AP61-201ENST00000443410 636 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL034418.1-201ENST00000448675 860 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 IGHV5-78-201ENST00000450948 295 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 PSMC1P13-201ENST00000458195 985 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 SNORD42A-201ENST00000459584 64 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 RPL7P24-201ENST00000493052 752 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 CEACAMP10-202ENST00000495431 496 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL358832.1-201ENST00000497800 389 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC097173.1-201ENST00000505862 819 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC138409.2-202ENST00000507274 458 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 COX6B1P5-201ENST00000509843 249 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL031320.1-201ENST00000604177 357 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC104458.1-201ENST00000608243 463 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 MIR7703-201ENST00000620784 77 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AL157786.1-207ENST00000627771 695 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 PABPC1P9-201ENST00000426076 1612 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 GTF2H2B-203ENST00000508065 1432 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
BCAS3Q9H6U6 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 AC018628.1-201ENST00000624147 3819 ntBASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 RNU6-181P-201ENST00000363225 107 ntBASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 RNU6-501P-201ENST00000364072 100 ntBASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 RNU6-1263P-201ENST00000384601 106 ntBASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 CYB5AP4-201ENST00000396692 399 ntBASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 OR51A5P-201ENST00000415429 942 ntBASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 RPL7P30-201ENST00000420888 709 ntBASIC5.72□□□□□ -1.49
BCAS3Q9H6U6 Z93242.1-201ENST00000427102 353 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms