Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 GNG5P5-201ENST00000420444 220 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 ZYG11AP1-201ENST00000430329 837 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 LYPLA1P1-201ENST00000434514 622 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 MTCYBP45-201ENST00000435243 565 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 SLC31A1P1-201ENST00000451221 567 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 OR52A4P-201ENST00000472867 958 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 ARL4AP2-201ENST00000507378 601 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AF131216.2-201ENST00000512316 564 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 RNA5SP230-201ENST00000517039 122 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 DEFB131D-201ENST00000526803 184 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 OR8A2P-201ENST00000528631 952 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 PMS2P3-207ENST00000529061 717 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 CYCSP2-201ENST00000558168 301 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 MIR4260-201ENST00000583107 67 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC060780.3-201ENST00000589464 80 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC091488.1-201ENST00000604239 660 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC112187.2-201ENST00000604345 283 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AL139286.1-201ENST00000604465 483 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC010200.2-201ENST00000605098 235 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AP003400.3-201ENST00000624904 346 ntBASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
FOXP3Q9BZS1 AC092376.2-201ENST00000622621 4116 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 ABCC13-202ENST00000463099 3842 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 RNA5SP326-201ENST00000363209 110 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 U3.7-201ENST00000363668 216 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 RNU6-534P-201ENST00000364877 106 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 RNU6-1122P-201ENST00000384449 107 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 RNU6-780P-201ENST00000391030 104 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 GAPDHP48-201ENST00000436626 961 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 SUMO2P3-201ENST00000438311 288 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC073465.2-201ENST00000440938 498 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 RPS7P5-201ENST00000441482 581 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL122020.1-201ENST00000472287 459 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC090638.1-201ENST00000498296 909 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 NENFP3-201ENST00000503735 313 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC021678.1-201ENST00000505195 936 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 SAP18P1-201ENST00000512058 390 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC024589.1-201ENST00000512207 263 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 MTCO1P35-201ENST00000515270 228 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 RNA5SP362-201ENST00000516048 118 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC027308.1-201ENST00000517993 110 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC022878.1-201ENST00000530684 149 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC090022.1-201ENST00000546569 311 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL157687.1-201ENST00000554853 619 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC096996.1-201ENST00000563813 325 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 MIR4489-201ENST00000578869 62 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 PRELID3BP8-201ENST00000604148 295 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 FAM27E4-201ENST00000605259 342 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL020991.1-201ENST00000612314 373 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 AL356274.1-201ENST00000617064 410 ntBASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
FOXP3Q9BZS1 FER-210ENST00000628534 558 ntTSL 5 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms