Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC044797.1-201ENST00000445744 679 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AL136097.1-201ENST00000456945 913 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 EIF4A2P4-201ENST00000458691 1196 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RPS20P4-201ENST00000461659 355 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC018635.1-201ENST00000468292 1030 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC007537.2-201ENST00000472093 511 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 KRTAP5-14P-201ENST00000502328 121 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 TPT1P8-201ENST00000510120 555 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RFESD-208ENST00000513950 464 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RNU6-1004P-201ENST00000516584 111 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 SNORA31.13-201ENST00000516624 135 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 RNU7-143P-201ENST00000516781 65 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 BRD9P1-201ENST00000529855 560 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AP000916.1-201ENST00000533869 835 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 MIR4310-201ENST00000582950 57 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC090330.1-201ENST00000588646 764 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AL158050.2-201ENST00000605336 568 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 FAM27D1-201ENST00000612308 341 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC016597.2-201ENST00000613256 341 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC004808.1-201ENST00000627671 721 ntBASIC4□□□□□ -1.77
CCDC28BQ9BUN5 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
CCDC28BQ9BUN5 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AL136964.1-201ENST00000622038 2990 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 BRAFP1-201ENST00000445336 2703 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 DHX40P1-201ENST00000588725 1412 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 SNORD56.4-201ENST00000363883 71 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 RPL22P22-201ENST00000395439 379 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AP002784.2-201ENST00000397300 549 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 RN7SKP177-201ENST00000410567 355 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC008173.1-201ENST00000418901 264 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AL356387.2-201ENST00000422272 243 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC017083.1-201ENST00000428093 483 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 RPL34P26-201ENST00000445636 354 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC092685.1-201ENST00000447960 1243 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 HMGB1P26-201ENST00000452520 628 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 RPL7P48-201ENST00000461513 746 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 RPL23AP14-201ENST00000468281 468 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC109327.1-201ENST00000471666 403 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 RPS23P1-201ENST00000491662 432 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 FTH1P9-201ENST00000513251 355 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC104115.2-201ENST00000523026 687 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AP001922.4-201ENST00000526967 290 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 OR5AN2P-201ENST00000534535 896 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC087894.1-201ENST00000538359 518 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 MIR4716-201ENST00000579628 84 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC012417.1-201ENST00000582307 1039 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC245884.10-201ENST00000597355 337 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC068790.7-201ENST00000602347 528 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC245100.7-201ENST00000609678 442 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC011472.4-201ENST00000615848 491 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 AL356118.1-201ENST00000635272 1078 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 EIF2AP4-201ENST00000424793 1781 ntBASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCDC28BQ9BUN5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCDC28BQ9BUN5 OR4K15-201ENST00000305051 1216 ntBASIC3.98□□□□□ -1.77
CCDC28BQ9BUN5 RNU6-666P-201ENST00000363499 107 ntBASIC3.98□□□□□ -1.77
CCDC28BQ9BUN5 SNORA72.3-201ENST00000365074 132 ntBASIC3.98□□□□□ -1.77
CCDC28BQ9BUN5 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.98□□□□□ -1.77
CCDC28BQ9BUN5 AL645927.1-201ENST00000396783 406 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms