Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
USB1Q9BQ65 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 ZNF268-201ENST00000228289 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USB1Q9BQ65 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
USB1Q9BQ65 LINC02547-201ENST00000531559 3308 ntTSL 2 BASIC6.55□□□□□ -1.36
USB1Q9BQ65 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
USB1Q9BQ65 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 LINC02019-201ENST00000608605 2060 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 HERC4-202ENST00000373700 3905 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC023886.2-201ENST00000321285 411 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 Y_RNA.270-201ENST00000364693 104 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 Y_RNA.291-201ENST00000364886 113 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 RNA5SP238-201ENST00000365464 120 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 RNU6-1226P-201ENST00000384317 107 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 MIR498-201ENST00000385134 124 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 RNA5SP107-201ENST00000411358 122 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 GSTA10P-201ENST00000412182 576 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC023141.10-201ENST00000415634 200 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 FTOP1-201ENST00000419363 861 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 FDPSP6-201ENST00000425091 512 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AL773545.1-201ENST00000425632 347 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC239367.3-201ENST00000428996 814 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC073900.1-201ENST00000429766 776 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC110602.1-201ENST00000437414 318 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AL031681.1-201ENST00000443304 400 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AL845321.1-201ENST00000444603 348 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC005550.2-201ENST00000476382 318 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC106760.2-201ENST00000504159 619 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC112484.3-201ENST00000505910 329 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC005341.1-201ENST00000571086 708 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC036176.3-201ENST00000602456 418 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 FXYD6P1-201ENST00000604857 285 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC025162.2-201ENST00000619602 560 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 MSL3-206ENST00000380693 2377 ntTSL 2 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 PABPC1P7-201ENST00000413177 1513 ntBASIC6.54□□□□□ -1.36
USB1Q9BQ65 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC6.54□□□□□ -1.36
USB1Q9BQ65 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
USB1Q9BQ65 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 LINC02203-204ENST00000628444 2323 ntTSL 2 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
USB1Q9BQ65 RNA5SP396-201ENST00000364834 120 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 RNU6-806P-201ENST00000365147 105 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC004386.1-201ENST00000393214 761 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AC097374.1-203ENST00000400783 485 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 AP000580.1-201ENST00000404439 358 ntBASIC6.53□□□□□ -1.36
USB1Q9BQ65 GSTM3P2-201ENST00000412746 530 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms