Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC093698.1-201ENST00000423843 571 ntBASIC3.98□□□□□ -1.77
C9orf72Q96LT7 AC115285.1-201ENST00000424879 736 ntBASIC3.98□□□□□ -1.77
C9orf72Q96LT7 NPM1P24-201ENST00000428039 894 ntBASIC3.98□□□□□ -1.77
C9orf72Q96LT7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 CBX3P5-201ENST00000552017 521 ntBASIC3.98□□□□□ -1.77
C9orf72Q96LT7 AL133457.1-201ENST00000564251 987 ntBASIC3.98□□□□□ -1.77
C9orf72Q96LT7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 MIR1254-2-201ENST00000579553 63 ntBASIC3.98□□□□□ -1.77
C9orf72Q96LT7 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 MIR6875-201ENST00000617506 72 ntBASIC3.98□□□□□ -1.77
C9orf72Q96LT7 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
C9orf72Q96LT7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 CASC19-261ENST00000641853 1638 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 RNU6-666P-201ENST00000363499 107 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 RNU6-244P-201ENST00000391028 104 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 RPL32P23-201ENST00000397237 405 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 HSPE1P8-201ENST00000406997 288 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 MIR1183-201ENST00000408856 89 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 TRGV6-201ENST00000417928 299 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 RPL36AP36-201ENST00000418616 301 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 OR8F1P-201ENST00000425243 930 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC009965.2-201ENST00000425328 970 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 TBCAP1-201ENST00000436520 327 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC239367.2-201ENST00000447309 705 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC011037.1-201ENST00000483964 558 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 TRBV12-2-201ENST00000489763 344 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 FTH1P21-201ENST00000512179 511 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC053481.4-201ENST00000583164 216 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 ATE1-AS1-202ENST00000636460 506 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AC007529.1-201ENST00000418574 2178 ntBASIC3.97□□□□□ -1.77
C9orf72Q96LT7 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.97□□□□□ -1.77
C9orf72Q96LT7 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.96□□□□□ -1.77
C9orf72Q96LT7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
C9orf72Q96LT7 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.96□□□□□ -1.77
C9orf72Q96LT7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
C9orf72Q96LT7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC3.96□□□□□ -1.77
C9orf72Q96LT7 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 RPL21P109-201ENST00000422213 475 ntBASIC3.96□□□□□ -1.78
C9orf72Q96LT7 Z85994.2-201ENST00000434327 452 ntBASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AC010307.1-201ENST00000467206 836 ntBASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AC007537.2-201ENST00000472093 511 ntBASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AC010460.1-201ENST00000507087 466 ntBASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AC087369.1-201ENST00000520775 996 ntBASIC3.96□□□□□ -1.78
C9orf72Q96LT7 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 OR4V1P-201ENST00000525394 1140 ntBASIC3.96□□□□□ -1.78
C9orf72Q96LT7 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.96□□□□□ -1.78
C9orf72Q96LT7 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms