Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 RNU1-13P-201ENST00000384499 162 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 RNU2-37P-201ENST00000410695 177 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 MTCYBP7-201ENST00000419540 1134 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 Z97055.1-201ENST00000419730 712 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC009263.1-201ENST00000441193 1239 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 RN7SL93P-201ENST00000463035 293 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC110792.1-201ENST00000491826 472 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 BTF3L4P4-201ENST00000506381 449 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AL133247.2-201ENST00000603236 482 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AL590392.1-201ENST00000604960 446 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AL136295.6-201ENST00000610486 658 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC083809.1-201ENST00000615051 472 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 U7.8-201ENST00000619968 63 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AC073530.2-201ENST00000623987 261 ntBASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ZNF439Q8NDP4 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 SAGE2P-201ENST00000420011 2126 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 SNORA62-201ENST00000365493 153 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 U1.1-201ENST00000384101 164 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 HLFP1-201ENST00000402375 499 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AL049693.1-201ENST00000402760 611 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 PRELID3BP11-201ENST00000414230 479 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC007390.1-201ENST00000415722 356 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 HMGB1P32-201ENST00000425971 565 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 IFNNP1-201ENST00000429219 553 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC114755.5-201ENST00000447760 831 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 RPS20P32-201ENST00000456044 356 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 RNU7-170P-201ENST00000459303 61 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 RPL21P11-201ENST00000461458 483 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC010307.1-201ENST00000467206 836 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC021205.1-201ENST00000468797 348 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 TMED11P-201ENST00000479478 690 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC078817.1-201ENST00000492623 435 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 CEACAMP10-202ENST00000495431 496 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 OR5H4P-201ENST00000510851 923 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 FTH1P21-201ENST00000512179 511 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 RNU2-58P-201ENST00000516403 183 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 HIGD1AP10-201ENST00000527837 282 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 OR4A12P-201ENST00000530847 918 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 NPM1P47-201ENST00000560843 856 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 MFSD8-236ENST00000641509 4050 ntBASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
ZNF439Q8NDP4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 C4BPAP2-201ENST00000428434 478 ntBASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 Z74696.2-201ENST00000436514 498 ntBASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 AC092809.1-201ENST00000441469 474 ntBASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 AC006511.1-201ENST00000470614 315 ntBASIC3.16□□□□□ -1.9
ZNF439Q8NDP4 AC084198.1-201ENST00000477747 402 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms