Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AC025449.1-201ENST00000603896 529 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC006566.1-201ENST00000608943 513 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC091304.9-201ENST00000612091 226 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 AC006338.1-201ENST00000618453 749 ntBASIC4.97□□□□□ -1.61
VRK3Q8IV63 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.97□□□□□ -1.61
VRK3Q8IV63 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VRK3Q8IV63 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.96□□□□□ -1.61
VRK3Q8IV63 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VRK3Q8IV63 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
VRK3Q8IV63 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VRK3Q8IV63 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
VRK3Q8IV63 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.96□□□□□ -1.61
VRK3Q8IV63 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
VRK3Q8IV63 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 ICE2P1-201ENST00000512800 1849 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC008033.1-201ENST00000216407 1162 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 Y_RNA.61-201ENST00000362835 102 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 RN7SKP113-201ENST00000363891 295 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 Y_RNA.311-201ENST00000365068 96 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 RNU4-31P-201ENST00000384211 141 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 MIR765-201ENST00000390226 114 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 SNORD65.1-201ENST00000390889 71 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 Y_RNA.582-201ENST00000391023 95 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 CIR1P3-201ENST00000405137 479 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 SNORA77-201ENST00000408716 125 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 OR51A5P-201ENST00000415429 942 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 COX6CP13-201ENST00000428703 226 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AL512286.1-201ENST00000439244 400 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 KNOP1P3-201ENST00000446933 426 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 CALM1P2-201ENST00000452941 448 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 DNAJC19P1-201ENST00000455312 319 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 HSPE1P22-201ENST00000456856 327 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC091180.1-201ENST00000462104 372 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 MTND1P16-201ENST00000465177 898 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 HMGN2P25-201ENST00000486956 268 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 RN7SL808P-201ENST00000496066 299 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 RN7SKP298-201ENST00000515950 94 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 IGLV2-28-201ENST00000520681 304 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC083923.1-201ENST00000523708 376 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 OR10G5P-201ENST00000532733 358 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC068993.1-201ENST00000546724 589 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 OR7E18P-201ENST00000592589 702 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC006272.2-201ENST00000594725 163 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AL445222.1-201ENST00000607259 628 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC092954.2-201ENST00000609103 430 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 SDR42E1P1-201ENST00000611327 477 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC005962.2-201ENST00000611427 652 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AL157786.1-207ENST00000627771 695 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.96□□□□□ -1.62
VRK3Q8IV63 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.96□□□□□ -1.62
VRK3Q8IV63 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
VRK3Q8IV63 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AC073136.1-201ENST00000449426 2884 ntBASIC4.95□□□□□ -1.62
VRK3Q8IV63 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK3Q8IV63 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK3Q8IV63 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
VRK3Q8IV63 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
VRK3Q8IV63 Y_RNA.256-201ENST00000364594 104 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms