Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AL162578.1-201ENST00000406202 378 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 TXNP7-201ENST00000406296 293 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 OR4K12P-201ENST00000406538 961 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 RPL23AP74-201ENST00000437246 471 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 RPS12P17-201ENST00000438591 377 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 H3F3BP1-201ENST00000440551 403 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 FAM103A2P-201ENST00000444122 354 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 MTCO2P29-201ENST00000465212 189 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 RPL7P22-201ENST00000466005 733 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 PABPC1P3-201ENST00000469174 459 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AP001025.2-201ENST00000490908 477 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC083795.1-201ENST00000491760 320 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 GAPDHP56-201ENST00000506031 988 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 TOMM22P4-201ENST00000511318 336 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC104986.1-201ENST00000517978 436 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC026826.3-201ENST00000561747 158 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC009117.1-201ENST00000563948 554 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC005668.1-201ENST00000571142 476 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC008687.2-201ENST00000597865 520 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 AC134882.1-201ENST00000603738 1676 ntBASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
UBE3DQ7Z6J8 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC092162.3-201ENST00000624511 1624 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 OR5J1P-201ENST00000313544 939 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RNU5E-1-201ENST00000362477 120 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RNU6-984P-201ENST00000363236 109 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RNA5SP211-201ENST00000365516 117 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RNU6-1158P-201ENST00000391167 107 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AL096800.1-201ENST00000405326 893 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 SNRPEP6-201ENST00000407465 277 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RNU6-1068P-201ENST00000410958 103 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AL354890.1-201ENST00000413730 346 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 VN1R36P-201ENST00000414936 291 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RBMY2QP-201ENST00000429799 1147 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC018644.1-201ENST00000429934 551 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 ATP5JP1-201ENST00000431631 322 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RPS7P3-201ENST00000443360 580 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RPL36AP15-201ENST00000444514 266 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC104164.1-201ENST00000460282 590 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC090453.1-201ENST00000495560 436 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC026427.2-201ENST00000506228 536 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RN7SKP238-201ENST00000516483 249 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 RNA5SP340-201ENST00000517132 107 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC022861.1-201ENST00000522981 663 ntBASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC5.68□□□□□ -1.5
UBE3DQ7Z6J8 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 169.7 ms