Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AP000889.1-201ENST00000530968 660 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC011921.2-201ENST00000589465 152 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 CYP2C61P-201ENST00000604072 290 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC004241.2-201ENST00000614562 444 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC005899.7-201ENST00000618199 588 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC137590.2-201ENST00000619709 240 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC009318.4-201ENST00000620496 486 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 AC078938.1-201ENST00000620993 318 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 BIN2P1-201ENST00000504996 1530 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 NRK-204ENST00000540278 1687 ntTSL 2 BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 ADAM24P-201ENST00000398655 2101 ntBASIC6.55□□□□□ -1.36
FOXR1Q6PIV2 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 SSX7-201ENST00000298181 1311 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 RNU6-1062P-201ENST00000383908 107 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 SNORA19-201ENST00000384737 128 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AL391419.1-201ENST00000398901 1275 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 MIR1305-201ENST00000408300 86 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 RNU6-370P-201ENST00000411008 104 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC019097.1-201ENST00000424783 735 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 RPS10P18-201ENST00000442662 495 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 PFN1P11-201ENST00000445829 389 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC093166.3-201ENST00000448785 303 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC018638.3-201ENST00000461273 132 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 APOOP2-201ENST00000461561 539 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC090142.1-201ENST00000465776 462 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC104564.1-201ENST00000493028 407 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC093664.1-201ENST00000511779 289 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 RNA5SP318-201ENST00000516352 92 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 IGHV1-14-201ENST00000523391 241 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC005519.1-201ENST00000554490 601 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 GLYATL1P2-202ENST00000588046 902 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC004908.1-201ENST00000606572 541 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AC119674.1-212ENST00000641155 993 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 MAPK10-338ENST00000641647 3362 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AL359263.1-201ENST00000441188 2796 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 SHQ1P1-201ENST00000437111 1544 ntBASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.54□□□□□ -1.36
FOXR1Q6PIV2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 AL512329.1-201ENST00000404600 1592 ntBASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 SNRPEP3-201ENST00000338402 276 ntBASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 Y_RNA.46-201ENST00000362695 102 ntBASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 RNA5SP140-201ENST00000364524 92 ntBASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 RNA5SP485-201ENST00000365053 119 ntBASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 SNORA70.3-201ENST00000365075 132 ntBASIC6.53□□□□□ -1.36
FOXR1Q6PIV2 RNU1-55P-201ENST00000365510 158 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms