Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AL359922.3-201ENST00000624779 1670 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC016716.1-201ENST00000265882 708 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC008549.2-201ENST00000333482 706 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 SNORA70.4-201ENST00000365509 134 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 SFR1P1-201ENST00000403720 688 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 GSTA8P-201ENST00000404253 637 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 QRSL1P2-201ENST00000418582 964 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 OR2X1P-201ENST00000421144 687 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 EIF4HP2-201ENST00000424380 563 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 RPL7P4-203ENST00000430239 730 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 RPS6P12-201ENST00000432491 726 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 ACTR3P2-201ENST00000439585 1257 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC004865.1-201ENST00000442276 1003 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AL354714.3-201ENST00000447284 493 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC104306.1-201ENST00000449702 371 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 ZNF886P-201ENST00000450781 723 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC063943.1-201ENST00000465434 453 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC069528.1-202ENST00000482888 637 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC109471.1-201ENST00000511631 612 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 RPL7L1P13-201ENST00000511702 739 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 BTF3P13-201ENST00000513224 490 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 RN7SKP265-201ENST00000516448 223 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 RN7SKP92-201ENST00000517266 244 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC023632.1-201ENST00000518463 375 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 OR8K4P-201ENST00000534608 872 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 MTND3P13-201ENST00000574391 343 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 VN1R85P-201ENST00000601587 426 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AL020997.3-201ENST00000602843 359 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 MTND3P19-201ENST00000603825 345 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC245389.1-201ENST00000605141 529 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC140725.3-201ENST00000616193 880 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC010975.3-201ENST00000618727 978 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC013470.4-201ENST00000619978 986 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC018529.3-201ENST00000624212 2254 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 AC017104.4-201ENST00000636283 1592 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 TLK1P1-201ENST00000456760 2440 ntBASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
PDLIM3Q53GG5 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 DDX18P5-201ENST00000534547 1306 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AL355578.1-201ENST00000607405 1328 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 OR11H5P-202ENST00000641612 1325 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AL672167.1-205ENST00000641112 3080 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 RNU4-68P-201ENST00000364314 141 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 RNA5SP171-201ENST00000391071 115 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4□□□□□ -1.77
PDLIM3Q53GG5 U3.35-201ENST00000408405 208 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 RNU2-6P-201ENST00000411404 190 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 OR4K6P-201ENST00000416478 897 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 RPS3AP37-201ENST00000419176 745 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 RPS12P23-201ENST00000419579 400 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4□□□□□ -1.77
PDLIM3Q53GG5 TRIM60P3Y-201ENST00000432201 673 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 BX323845.1-201ENST00000432417 179 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC092162.1-201ENST00000432828 434 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AL591719.1-201ENST00000444669 744 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 HMGB3P6-201ENST00000444896 598 ntBASIC4□□□□□ -1.77
PDLIM3Q53GG5 AC097484.1-201ENST00000471148 389 ntBASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms