Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 CTSL3P-202ENST00000412179 788 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 BMS1P19-201ENST00000433925 393 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC129850.1-201ENST00000436203 508 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 TRGVB-201ENST00000453257 471 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC097493.1-201ENST00000463958 372 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 RNF138P1-201ENST00000502765 546 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 NIFKP7-201ENST00000503365 834 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC090071.1-201ENST00000507713 644 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 TBCA-206ENST00000518338 551 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 ACTR3BP3-201ENST00000565577 979 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC087783.2-201ENST00000605070 562 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 FAM157B-203ENST00000639350 358 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 CR381670.1-201ENST00000624291 1693 ntBASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCDC144BQ3MJ40 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 SNURFL-201ENST00000309296 343 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 RPL21P132-201ENST00000331267 462 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 RNU6-462P-201ENST00000362659 105 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 RPS3AP26-201ENST00000398259 784 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AL512430.2-201ENST00000406786 339 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 RNU2-21P-201ENST00000410368 188 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 ATP6V1G1P7-201ENST00000415853 349 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AL121878.1-201ENST00000418638 859 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC093698.1-201ENST00000423843 571 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC104837.2-201ENST00000427236 424 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 MTND1P20-201ENST00000430341 950 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 UBE2FP3-201ENST00000436366 524 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC073387.1-201ENST00000453261 709 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 snoU13.20-201ENST00000459180 104 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC058823.1-201ENST00000485315 474 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC007686.1-201ENST00000488511 463 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC069304.1-201ENST00000491593 704 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AL049874.2-201ENST00000492636 288 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 LTV1P1-201ENST00000510683 1237 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 GTF2F2P1-201ENST00000511083 675 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC106038.2-201ENST00000520706 568 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 CR383656.6-201ENST00000550518 394 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 CYCSP2-201ENST00000558168 301 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 MIR5186-201ENST00000577504 120 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 BNIP3P11-201ENST00000603878 563 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC009597.2-201ENST00000604659 592 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 AC024560.3-201ENST00000608482 349 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 uc_338.7-201ENST00000621834 124 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 NCLP2-201ENST00000416078 1462 ntBASIC6□□□□□ -1.45
CCDC144BQ3MJ40 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCDC144BQ3MJ40 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 HSPA8P14-201ENST00000552265 1805 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC100778.3-201ENST00000580060 1750 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 Y_RNA.302-201ENST00000364997 102 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 RNA5SP88-201ENST00000365560 109 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 SNORA51.6-201ENST00000384151 125 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 MIR600-201ENST00000385007 98 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 RPL21P67-201ENST00000402896 478 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 OR8G2P-201ENST00000412796 908 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 NPM1P34-201ENST00000428821 893 ntBASIC5.99□□□□□ -1.45
CCDC144BQ3MJ40 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms