Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 USP9YP21-201ENST00000420603 432 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 C1DP1-201ENST00000426049 402 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 PTGES3P1-201ENST00000439531 483 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC000111.2-201ENST00000448200 210 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 MRPL42P4-201ENST00000453267 443 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC109462.1-201ENST00000491087 368 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AC008953.1-201ENST00000497334 318 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC139783.2-201ENST00000504847 1145 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN1BQ07699 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 IGLVIV-53-201ENST00000520107 367 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AP000790.1-201ENST00000528891 737 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.08□□□□□ -1.76
SCN1BQ07699 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN1BQ07699 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCN1BQ07699 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.08□□□□□ -1.76
SCN1BQ07699 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.08□□□□□ -1.76
SCN1BQ07699 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AC008536.1-201ENST00000602872 669 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AL139286.1-201ENST00000604465 483 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 Z82195.1-201ENST00000604558 398 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AP003973.1-201ENST00000604639 691 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 MEMO1P5-201ENST00000604810 406 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AC005084.1-201ENST00000605160 304 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 AP000255.1-201ENST00000610276 676 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
SCN1BQ07699 AL627171.1-201ENST00000618845 1308 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN1BQ07699 AL049777.1-201ENST00000622740 518 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN1BQ07699 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.08□□□□□ -1.76
SCN1BQ07699 LINC01739-205ENST00000641890 573 ntBASIC4.08□□□□□ -1.76
SCN1BQ07699 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
SCN1BQ07699 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.08□□□□□ -1.76
SCN1BQ07699 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN1BQ07699 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
SCN1BQ07699 MAPK10-263ENST00000641052 4307 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN1BQ07699 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 XIAPP3-201ENST00000312918 795 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SCN1BQ07699 RNU4-4P-201ENST00000364588 130 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
SCN1BQ07699 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 RNU1-106P-201ENST00000384382 164 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 RNU1-44P-201ENST00000384453 163 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 AL133264.1-201ENST00000407157 562 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AL136133.1-201ENST00000413694 376 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 RPS7P9-201ENST00000414704 586 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN1BQ07699 RAC1P3-201ENST00000416129 580 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 RPL23AP25-201ENST00000430973 463 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN1BQ07699 LYPLA1P1-201ENST00000434514 622 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 RPS17P8-201ENST00000434525 335 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
SCN1BQ07699 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN1BQ07699 AC104073.1-201ENST00000451988 151 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 SNRPGP5-201ENST00000456003 220 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 MTND2P39-201ENST00000457230 764 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AC078817.1-201ENST00000492623 435 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 DYNLL1P6-201ENST00000503440 264 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN1BQ07699 MTND3P3-201ENST00000505004 126 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 MRPS33P2-201ENST00000507850 322 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 RNA5SP34-201ENST00000516887 130 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 RNU6-1028P-201ENST00000517164 93 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN1BQ07699 MTCO3P15-201ENST00000526563 574 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.07□□□□□ -1.76
SCN1BQ07699 OR4A45P-201ENST00000529954 901 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
SCN1BQ07699 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC4.07□□□□□ -1.76
SCN1BQ07699 AC093519.1-201ENST00000566109 298 ntBASIC4.07□□□□□ -1.76
SCN1BQ07699 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.07□□□□□ -1.76
SCN1BQ07699 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms