Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 USP9YP4-201ENST00000424401 1745 ntBASIC4.46□□□□□ -1.69
VCPP55072 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
VCPP55072 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
VCPP55072 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 AC096656.1-201ENST00000623826 1364 ntBASIC4.46□□□□□ -1.7
VCPP55072 RNA5SP175-201ENST00000364275 119 ntBASIC4.46□□□□□ -1.7
VCPP55072 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.46□□□□□ -1.7
VCPP55072 MIR513A2-201ENST00000385249 127 ntBASIC4.46□□□□□ -1.7
VCPP55072 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 NDUFB4P4-201ENST00000404822 243 ntBASIC4.46□□□□□ -1.7
VCPP55072 RNA5SP104-201ENST00000410989 118 ntBASIC4.46□□□□□ -1.7
VCPP55072 RPL26P37-201ENST00000411983 438 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC013404.1-201ENST00000413068 249 ntBASIC4.46□□□□□ -1.7
VCPP55072 COX6B1P7-201ENST00000430845 235 ntBASIC4.46□□□□□ -1.7
VCPP55072 ZFAND6P1-201ENST00000434138 605 ntBASIC4.46□□□□□ -1.7
VCPP55072 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.46□□□□□ -1.7
VCPP55072 AL356276.2-201ENST00000435919 558 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.46□□□□□ -1.7
VCPP55072 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.46□□□□□ -1.7
VCPP55072 AL157827.1-201ENST00000447622 132 ntBASIC4.46□□□□□ -1.7
VCPP55072 AL627224.1-201ENST00000448334 444 ntBASIC4.46□□□□□ -1.7
VCPP55072 AL645939.1-201ENST00000453429 797 ntBASIC4.46□□□□□ -1.7
VCPP55072 AL121877.1-201ENST00000453704 622 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC090543.1-201ENST00000492168 485 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC104164.2-201ENST00000496953 495 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.46□□□□□ -1.7
VCPP55072 AC026427.2-201ENST00000506228 536 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.46□□□□□ -1.7
VCPP55072 VWA8P1-201ENST00000510889 176 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.46□□□□□ -1.7
VCPP55072 MTND2P31-201ENST00000512602 616 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.46□□□□□ -1.7
VCPP55072 OR5M7P-201ENST00000526140 972 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.46□□□□□ -1.7
VCPP55072 AC107016.1-201ENST00000550463 337 ntBASIC4.46□□□□□ -1.7
VCPP55072 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
VCPP55072 AL159169.3-201ENST00000608871 561 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC019176.2-201ENST00000611579 315 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC123768.4-201ENST00000616244 701 ntBASIC4.46□□□□□ -1.7
VCPP55072 AC116563.2-201ENST00000624751 535 ntBASIC4.46□□□□□ -1.7
VCPP55072 HPVC1-201ENST00000629899 1198 ntBASIC4.46□□□□□ -1.7
VCPP55072 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.46□□□□□ -1.7
VCPP55072 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.46□□□□□ -1.7
VCPP55072 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.46□□□□□ -1.7
VCPP55072 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 DDX6P1-205ENST00000441966 1436 ntBASIC4.46□□□□□ -1.7
VCPP55072 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VCPP55072 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.46□□□□□ -1.7
VCPP55072 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VCPP55072 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VCPP55072 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
VCPP55072 AC016588.2-201ENST00000632484 3021 ntBASIC4.45□□□□□ -1.7
VCPP55072 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.45□□□□□ -1.7
VCPP55072 RHOT1P2-201ENST00000366423 333 ntBASIC4.45□□□□□ -1.7
VCPP55072 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.45□□□□□ -1.7
VCPP55072 AL161631.1-201ENST00000417933 486 ntBASIC4.45□□□□□ -1.7
VCPP55072 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.45□□□□□ -1.7
VCPP55072 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.45□□□□□ -1.7
VCPP55072 BX119904.1-201ENST00000432026 348 ntBASIC4.45□□□□□ -1.7
VCPP55072 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.45□□□□□ -1.7
VCPP55072 RPS20P4-201ENST00000461659 355 ntBASIC4.45□□□□□ -1.7
VCPP55072 AC006511.1-201ENST00000470614 315 ntBASIC4.45□□□□□ -1.7
VCPP55072 AC025445.1-201ENST00000502728 300 ntBASIC4.45□□□□□ -1.7
VCPP55072 AC021087.2-201ENST00000504656 1203 ntBASIC4.45□□□□□ -1.7
VCPP55072 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.45□□□□□ -1.7
VCPP55072 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.45□□□□□ -1.7
VCPP55072 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.45□□□□□ -1.7
VCPP55072 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.45□□□□□ -1.7
VCPP55072 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.45□□□□□ -1.7
VCPP55072 AC006064.5-201ENST00000541782 248 ntBASIC4.45□□□□□ -1.7
VCPP55072 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
VCPP55072 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC4.45□□□□□ -1.7
VCPP55072 OR1AB1P-201ENST00000585564 761 ntBASIC4.45□□□□□ -1.7
VCPP55072 VN1R84P-201ENST00000593697 235 ntBASIC4.45□□□□□ -1.7
VCPP55072 AL606490.9-201ENST00000603331 271 ntBASIC4.45□□□□□ -1.7
VCPP55072 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.45□□□□□ -1.7
VCPP55072 AP004372.1-201ENST00000604842 844 ntBASIC4.45□□□□□ -1.7
VCPP55072 AC025175.1-201ENST00000606482 759 ntBASIC4.45□□□□□ -1.7
VCPP55072 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.45□□□□□ -1.7
VCPP55072 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
VCPP55072 AC138907.10-201ENST00000623708 983 ntBASIC4.45□□□□□ -1.7
VCPP55072 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.45□□□□□ -1.7
VCPP55072 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
VCPP55072 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.45□□□□□ -1.7
VCPP55072 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VCPP55072 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.45□□□□□ -1.7
VCPP55072 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.45□□□□□ -1.7
VCPP55072 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.45□□□□□ -1.7
VCPP55072 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VCPP55072 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
VCPP55072 AL356489.2-201ENST00000566968 3528 ntBASIC4.45□□□□□ -1.7
VCPP55072 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms